| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3196 |
|---|
| Symbol | |
|---|
| ID | 8884395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3375600 |
|---|
| End bp | 3377402 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003511959 |
|---|
| Protein GI | 291300681 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000171923 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000413572 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTATC GCGGTCCTTC TCCCCTATGG CGGGTGTGCG CGGGCGTGGC GGCGGTGGCG
CTGGCGTTGC CGGTTACGGC GTGTTCGGCC TCCGAGGATG ACCGGACGTT GATCACGTCG
GTGGATCAGA CCGTGGAGAA CCTGAACCCT TTGACGACGT TCTTCTCGTT GAACTATCAG
GTGAACAACC TGATCTACGT GCCGTTGATC CGGTTCGGCG CCAAGGACTA CTCCCCTGTC
GAGGGCCTGG CCACGAAATG GGAGCCGTCG AACGACAATC GGGTGTGGAC GTACACGATT
CGTGATGACG CGAAGTGGAG CGACGGCAAG GACATCACCG CGGCCGACGC GGCGTTCACG
TATCAGTTGC TGATGGACGA TAAGGCGTTG CGGGCTTCGC ATTCGGAACT GGTGAACAAT
TTCGCCTCGG TGAAGGCGCC GTCGGCGGAC AAGCTTGTCA TCGAGATCAA GAAACCGTCC
TCGCAGATGA CGGCTTTGGA CACACCGATC GTTCCCAAAC ACGTGTGGGA AAAGGTCGAC
AACCCGTCGA AATACAAGAA CACCGATTTT CCGGTGGTGA GTTCGGGACC GTTCATCGCC
ACGGATTTCG CGGTCGACGA GTTCATTAAG TTCGACGCGA ACAAGGATTT CTTCGGCGGG
GCGCCCAAGT ACGACAAGTT GGTGTTCCAG TACTACAAGA CCCCCGAGGC CGCGGTGCAG
GCGCTGCATT CGGGTGACGT GGACTTGGTG GGCGGGTTGA ATCCGGCCCA GTTCAAGTCG
TTGAAGGGCG AGGACAACAT CGCCACCAAC AAGGCGCAGA GCCGGTCGAC GACGTCGATC
ACGTTCAATG TGGGTGCCAA GGCGCAAAAC GGCGACATGA TCGGTGACGG GCATCCGGCG
TTGCGGGATT CGGTGGTGCG GCAGGCGATG CACGCGTCCA TCAACAAGGA CCGGTTGATC
GACAAGGTTC AGGACGGGTA CGCCGAACCG GGGGTGGCGT ATATTCCGCC GATCTTCGAT
GACTATTTCT GGGATCCCGG GGACGAGACC GTCAAGTTCG ACATAGAAGC GGCCGGGAAG
AAACTCGACA AGGCCGGGTA CAAGAAGGGT TCCGACGGGA TCCGCACGAT GCCCGACAGC
GACAAGAAAC TGGAGTTCCG GCTGCTGTAC CACTCCGACG AACCGTCGTA CGCCACGATC
GCGGAGTTCT TGAAGACCTG GTGGGAAGAG CTGGGTGTGG CCATCGAATT GGACAGTGCT
GATTCGACGA AGCTCAATGA CCAGTTGTAC GCGGGCCAGT ATGACGTGAT CTTCTCCGGG
TGGGGTGTGG ATCCGGATCC GACGCCGATT CTGGCGTTGT ACGCGTGTTC GTCGTTGCCG
GAGACGGCGA AGTCGGATGA GCGTGACACG GACACCTTCT ACTGCAACAA GGACTACGAC
AAGCTGTATG AGAAGCAGAA GGCTTCGACC GACGCCGAGG AGCGGGCGGC GTTGGTGGCG
GAGATGCAGC GGATTCAGTA TGTGGACGCG CCGCAGGTGA CGTTGTACTA CTCGAACGTG
TTGGAGGCGT ACCGGTCGGA TCGGTGGTCG GGGTTTGACA CGCAGCCTGC TGACGGCGGG
ATGATCCGTG GCCAGGAGGG GTCGTGGGGT TATGCGTCGG CGACGCCGGC TGCCGGTGGT
GGTGTCGGCG GTTCGGGGCC GTTGTGGGGT GGGATCGCGG CGGTCGTCGT GGTTGTCGCG
GGTGTGGGGT TGTGGTGGTG GTCGCGGCGT CGCCGGGCTG CCAGTGCGGA TGAGCGCGAA
TGA
|
|---|
| Protein sequence | MVYRGPSPLW RVCAGVAAVA LALPVTACSA SEDDRTLITS VDQTVENLNP LTTFFSLNYQ
VNNLIYVPLI RFGAKDYSPV EGLATKWEPS NDNRVWTYTI RDDAKWSDGK DITAADAAFT
YQLLMDDKAL RASHSELVNN FASVKAPSAD KLVIEIKKPS SQMTALDTPI VPKHVWEKVD
NPSKYKNTDF PVVSSGPFIA TDFAVDEFIK FDANKDFFGG APKYDKLVFQ YYKTPEAAVQ
ALHSGDVDLV GGLNPAQFKS LKGEDNIATN KAQSRSTTSI TFNVGAKAQN GDMIGDGHPA
LRDSVVRQAM HASINKDRLI DKVQDGYAEP GVAYIPPIFD DYFWDPGDET VKFDIEAAGK
KLDKAGYKKG SDGIRTMPDS DKKLEFRLLY HSDEPSYATI AEFLKTWWEE LGVAIELDSA
DSTKLNDQLY AGQYDVIFSG WGVDPDPTPI LALYACSSLP ETAKSDERDT DTFYCNKDYD
KLYEKQKAST DAEERAALVA EMQRIQYVDA PQVTLYYSNV LEAYRSDRWS GFDTQPADGG
MIRGQEGSWG YASATPAAGG GVGGSGPLWG GIAAVVVVVA GVGLWWWSRR RRAASADERE
|
|---|
| |