More than 300 homologs were found in PanDaTox collection
for query gene Haur_3501 on replicon NC_009972
Organism: Herpetosiphon aurantiacus ATCC 23779



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009972  Haur_2657  extracellular solute-binding protein  61.12 
 
 
617 aa  797    Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.0000297428  n/a   
 
 
-
 
NC_009972  Haur_3501  extracellular solute-binding protein  100 
 
 
639 aa  1301    Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.0000268642  n/a   
 
 
-
 
NC_009523  RoseRS_0093  extracellular solute-binding protein  29.94 
 
 
604 aa  275  1.0000000000000001e-72  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.503977 
 
 
-
 
NC_009767  Rcas_0197  extracellular solute-binding protein  30.8 
 
 
605 aa  244  3.9999999999999997e-63  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.386701  normal 
 
 
-
 
NC_011831  Cagg_2944  extracellular solute-binding protein family 5  31.49 
 
 
587 aa  242  2e-62  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0305195 
 
 
-
 
NC_009972  Haur_3496  extracellular solute-binding protein  26.94 
 
 
590 aa  206  1e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0324  extracellular solute-binding protein  31.24 
 
 
586 aa  204  6e-51  Deinococcus geothermalis DSM 11300  Bacteria  unclonable  0.000000261589  hitchhiker  0.0038707 
 
 
-
 
NC_014212  Mesil_2731  extracellular solute-binding protein family 5  26.9 
 
 
622 aa  181  4.999999999999999e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0520  extracellular solute-binding protein family 5  29.69 
 
 
545 aa  175  1.9999999999999998e-42  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5299  ABC transporter substrate binding protein (oligopeptide)  28.06 
 
 
556 aa  174  3.9999999999999995e-42  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0872  extracellular solute-binding protein  29.21 
 
 
541 aa  172  2e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  decreased coverage  0.00426332  n/a   
 
 
-
 
NC_007512  Plut_1621  peptide ABC transporter, periplasmic peptide-binding protein  27.54 
 
 
594 aa  167  4e-40  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008639  Cpha266_0567  extracellular solute-binding protein  27.86 
 
 
608 aa  167  6.9999999999999995e-40  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2097  4-phytase  28.63 
 
 
546 aa  165  2.0000000000000002e-39  Geobacter lovleyi SZ  Bacteria  unclonable  0.00000775897  n/a   
 
 
-
 
NC_009012  Cthe_0910  extracellular solute-binding protein  27.56 
 
 
555 aa  165  3e-39  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.463169  n/a   
 
 
-
 
NC_014212  Mesil_3074  extracellular solute-binding protein family 5  27.08 
 
 
621 aa  164  3e-39  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000149398  normal  0.300897 
 
 
-
 
NC_007413  Ava_1563  extracellular solute-binding protein  26.82 
 
 
588 aa  161  3e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.176735  normal  0.279007 
 
 
-
 
NC_010803  Clim_0614  extracellular solute-binding protein family 5  26.92 
 
 
593 aa  161  4e-38  Chlorobium limicola DSM 245  Bacteria  normal  0.459899  n/a   
 
 
-
 
NC_010718  Nther_2798  extracellular solute-binding protein family 5  28.54 
 
 
557 aa  160  6e-38  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0337  extracellular solute-binding protein family 5  29.18 
 
 
581 aa  159  1e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007514  Cag_1765  peptide ABC transporter, periplasmic peptide-binding protein  26.67 
 
 
596 aa  160  1e-37  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.220703  n/a   
 
 
-
 
NC_010831  Cphamn1_0585  extracellular solute-binding protein family 5  29.31 
 
 
628 aa  157  5.0000000000000005e-37  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.952367  normal  0.0792841 
 
 
-
 
NC_011773  BCAH820_0241  putative oligopeptide ABC transporter, oligopeptide-binding protein  28.78 
 
 
575 aa  155  1e-36  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_1483  extracellular solute-binding protein  28.98 
 
 
551 aa  155  1e-36  Methylobacillus flagellatus KT  Bacteria  normal  0.228319  normal  0.152124 
 
 
-
 
NC_010184  BcerKBAB4_0207  extracellular solute-binding protein  26.57 
 
 
567 aa  155  2e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0248  oligopeptide ABC transporter, oligopeptide-binding protein, putative  28.36 
 
 
575 aa  154  4e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0209  oligopeptide ABC transporter, oligopeptide-binding protein  28.57 
 
 
575 aa  154  4e-36  Bacillus cereus E33L  Bacteria  normal  0.019765  n/a   
 
 
-
 
NC_007530  GBAA_0231  oligopeptide ABC transporter oligopeptide-binding protein  28.36 
 
 
555 aa  154  5.9999999999999996e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1058  ABC-type dipeptide transport system periplasmic component-like protein  36.11 
 
 
653 aa  152  2e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0218  oligopeptide ABC transporter oligopeptide-binding protein  28.54 
 
 
559 aa  152  3e-35  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1870  dipeptide transport protein  26.47 
 
 
540 aa  151  3e-35  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0788  extracellular solute-binding protein family 5  27.52 
 
 
576 aa  151  3e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.301156 
 
 
-
 
NC_011726  PCC8801_2270  extracellular solute-binding protein family 5  28.04 
 
 
580 aa  150  8e-35  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2321  extracellular solute-binding protein family 5  28.04 
 
 
580 aa  150  8e-35  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.815964 
 
 
-
 
NC_002939  GSU1433  peptide ABC transporter, periplasmic peptide-binding protein  27.29 
 
 
538 aa  149  2.0000000000000003e-34  Geobacter sulfurreducens PCA  Bacteria  normal  0.948157  n/a   
 
 
-
 
NC_011060  Ppha_0691  extracellular solute-binding protein family 5  25.98 
 
 
600 aa  149  2.0000000000000003e-34  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0413  ABC-type dipeptide transport system periplasmic component-like protein  34.92 
 
 
653 aa  148  3e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.457116  normal 
 
 
-
 
NC_007517  Gmet_1234  extracellular solute-binding protein  27.33 
 
 
538 aa  147  5e-34  Geobacter metallireducens GS-15  Bacteria  normal  0.871598  normal  0.318753 
 
 
-
 
NC_009483  Gura_2049  extracellular solute-binding protein  26.83 
 
 
540 aa  146  9e-34  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2361  ABC-type dipeptide transport system periplasmic component-like protein  33.33 
 
 
445 aa  146  9e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0243915 
 
 
-
 
NC_011146  Gbem_2644  extracellular solute-binding protein family 5  27.37 
 
 
533 aa  146  9e-34  Geobacter bemidjiensis Bem  Bacteria  normal  0.0361873  n/a   
 
 
-
 
NC_003909  BCE_0247  oligopeptide ABC transporter, substrate-binding protein, putative  25.32 
 
 
567 aa  146  1e-33  Bacillus cereus ATCC 10987  Bacteria  normal  0.460021  n/a   
 
 
-
 
NC_011725  BCB4264_A0245  oligopeptide-binding protein OppA  28.76 
 
 
575 aa  145  2e-33  Bacillus cereus B4264  Bacteria  normal  0.0551474  n/a   
 
 
-
 
NC_009674  Bcer98_0219  extracellular solute-binding protein  28.08 
 
 
575 aa  145  2e-33  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0265  oligopeptide-binding protein OppA  25.32 
 
 
566 aa  145  2e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5080  oligopeptide-binding protein OppA  28.76 
 
 
575 aa  145  3e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1768  extracellular solute-binding protein family 5  27.54 
 
 
579 aa  144  5e-33  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000449992  n/a   
 
 
-
 
NC_008609  Ppro_2655  extracellular solute-binding protein  26.79 
 
 
539 aa  144  5e-33  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.0000125789  n/a   
 
 
-
 
NC_011658  BCAH187_A0266  extracellular solute-binding protein family 5  28.23 
 
 
575 aa  144  6e-33  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0208  extracellular solute-binding protein  28.08 
 
 
575 aa  143  9e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_0900  extracellular solute-binding protein family 5  27.12 
 
 
561 aa  140  4.999999999999999e-32  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2277  extracellular solute-binding protein family 5  24.87 
 
 
615 aa  140  6e-32  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.00527261  decreased coverage  0.000000000210766 
 
 
-
 
NC_012918  GM21_1590  extracellular solute-binding protein family 5  26.62 
 
 
534 aa  140  7e-32  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_2082  ABC transporter, binding protein component  27.31 
 
 
605 aa  140  7e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.645423 
 
 
-
 
NC_005957  BT9727_0205  oligopeptide ABC transporter, oligopeptide-binding protein  28.27 
 
 
575 aa  140  1e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0195  extracellular solute-binding protein  26.79 
 
 
526 aa  139  2e-31  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011726  PCC8801_0359  extracellular solute-binding protein family 5  26.72 
 
 
607 aa  136  9.999999999999999e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0366  extracellular solute-binding protein family 5  26.72 
 
 
607 aa  136  9.999999999999999e-31  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_16530  ABC-type dipeptide transport system, periplasmic component  26.27 
 
 
510 aa  134  3.9999999999999996e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.564688 
 
 
-
 
NC_008261  CPF_2555  oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein  27.05 
 
 
580 aa  134  6e-30  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_19910  ABC-type dipeptide transport system, periplasmic component  27.43 
 
 
589 aa  134  6.999999999999999e-30  Saccharomonospora viridis DSM 43017  Bacteria  hitchhiker  0.000984023  hitchhiker  0.000242655 
 
 
-
 
NC_008262  CPR_2258  solute-binding family 5 protein  27.05 
 
 
579 aa  134  6.999999999999999e-30  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0404  peptide ABC transporter, periplasmic peptide-binding protein, putative  24.64 
 
 
562 aa  133  1.0000000000000001e-29  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.195292  n/a   
 
 
-
 
NC_009720  Xaut_2760  extracellular solute-binding protein  28.07 
 
 
544 aa  132  2.0000000000000002e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0786  peptide ABC transporter, periplasmic peptide-binding protein, putative  27.14 
 
 
537 aa  132  3e-29  Brucella suis 1330  Bacteria  normal  0.527095  n/a   
 
 
-
 
NC_008639  Cpha266_1789  extracellular solute-binding protein  27.19 
 
 
572 aa  131  3e-29  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0940  extracellular solute-binding protein family 5  25.42 
 
 
559 aa  131  5.0000000000000004e-29  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1273  extracellular solute-binding protein family 5  26.82 
 
 
593 aa  128  3e-28  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3968  extracellular solute-binding protein  26.06 
 
 
537 aa  127  5e-28  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.252184  n/a   
 
 
-
 
NC_014165  Tbis_0310  extracellular solute-binding protein family 5  28.93 
 
 
509 aa  126  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3131  extracellular solute-binding protein  25.65 
 
 
508 aa  126  1e-27  Chelativorans sp. BNC1  Bacteria  normal  0.792469  n/a   
 
 
-
 
NC_008686  Pden_0608  extracellular solute-binding protein  27.57 
 
 
566 aa  126  1e-27  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_0982  extracellular solute-binding protein family 5  27.87 
 
 
567 aa  125  2e-27  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0210  extracellular solute-binding protein  27.07 
 
 
512 aa  125  3e-27  Methanospirillum hungatei JF-1  Archaea  normal  0.0873116  normal 
 
 
-
 
NC_013093  Amir_3466  extracellular solute-binding protein family 5  27.83 
 
 
596 aa  124  6e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0853012  n/a   
 
 
-
 
NC_005945  BAS0623  oligopeptide ABC transporter oligopeptide-binding protein  26.58 
 
 
593 aa  123  9.999999999999999e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0566  oligopeptide ABC transporter, oligopeptide-binding protein  26.64 
 
 
593 aa  123  9.999999999999999e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3875  ABC transporter substrate binding protein (oligopeptide)  24.4 
 
 
568 aa  123  9.999999999999999e-27  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0656  oligopeptide ABC transporter oligopeptide-binding protein  26.58 
 
 
593 aa  123  9.999999999999999e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0713  oligopeptide ABC transporter, oligopeptide-binding protein  26.58 
 
 
593 aa  123  9.999999999999999e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00303874 
 
 
-
 
NC_007355  Mbar_A1979  oligopeptide ABC transporter, solute-binding protein  29.07 
 
 
516 aa  122  3e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_014210  Ndas_0631  extracellular solute-binding protein family 5  26.08 
 
 
631 aa  121  3e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  decreased coverage  0.00116155  normal  0.250691 
 
 
-
 
NC_011883  Ddes_1538  extracellular solute-binding protein family 5  25.82 
 
 
563 aa  121  3.9999999999999996e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  hitchhiker  0.000498479  n/a   
 
 
-
 
NC_003909  BCE_0724  oligopeptide ABC transporter, oligopeptide-binding protein  26.43 
 
 
593 aa  121  3.9999999999999996e-26  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2032  ABC transporter, periplasmic binding protein  27.4 
 
 
524 aa  121  3.9999999999999996e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.662418  normal  0.30348 
 
 
-
 
NC_007604  Synpcc7942_1169  oligopeptide-binding protein of oligopeptide ABC transporter  25.55 
 
 
587 aa  121  4.9999999999999996e-26  Synechococcus elongatus PCC 7942  Bacteria  normal  0.317639  normal 
 
 
-
 
NC_008554  Sfum_1411  extracellular solute-binding protein  26.4 
 
 
559 aa  120  4.9999999999999996e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6144  extracellular solute-binding protein family 5  24.94 
 
 
533 aa  120  6e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.5133  hitchhiker  0.00348679 
 
 
-
 
NC_007413  Ava_1810  extracellular solute-binding protein  26.21 
 
 
595 aa  120  7e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0567  oligopeptide ABC transporter, oligopeptide-binding protein  26.51 
 
 
592 aa  120  7.999999999999999e-26  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0785  oligopeptide ABC transporter, oligopeptide-binding protein  26.79 
 
 
593 aa  120  7.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011371  Rleg2_6559  extracellular solute-binding protein family 5  25.06 
 
 
536 aa  119  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.67626  normal  0.403463 
 
 
-
 
NC_011901  Tgr7_0947  extracellular solute-binding protein family 5  24.13 
 
 
622 aa  119  1.9999999999999998e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2203  extracellular solute-binding protein family 5  27.54 
 
 
531 aa  119  1.9999999999999998e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0247328 
 
 
-
 
NC_011729  PCC7424_1649  extracellular solute-binding protein family 5  24.12 
 
 
584 aa  119  1.9999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_3196  extracellular solute-binding protein family 5  26.78 
 
 
600 aa  118  3e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  hitchhiker  0.0000171923  unclonable  0.0000000000413572 
 
 
-
 
NC_008751  Dvul_1145  extracellular solute-binding protein  23.53 
 
 
565 aa  118  3e-25  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00838015  normal  0.546746 
 
 
-
 
NC_013739  Cwoe_2945  extracellular solute-binding protein family 5  26.48 
 
 
565 aa  118  3.9999999999999997e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.472455  normal  0.0524757 
 
 
-
 
NC_009972  Haur_1605  extracellular solute-binding protein  26.7 
 
 
595 aa  117  3.9999999999999997e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0996  oligopeptide ABC transporter, oligopeptide-binding protein  25.11 
 
 
528 aa  117  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    unclonable  4.41324e-61 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>