More than 300 homologs were found in PanDaTox collection
for query gene Krad_2165 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_2165  sugar ABC transporter  100 
 
 
216 aa  425  1e-118  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_06280  permease component of ABC-type sugar transporter  56.06 
 
 
303 aa  223  2e-57  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  56.61 
 
 
316 aa  216  2.9999999999999998e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  51.83 
 
 
292 aa  207  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  44.72 
 
 
336 aa  194  7e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4689  binding-protein-dependent transport systems inner membrane component  48.72 
 
 
298 aa  190  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.664924 
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  41.88 
 
 
318 aa  161  5.0000000000000005e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  38.46 
 
 
314 aa  159  3e-38  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  38.46 
 
 
314 aa  159  3e-38  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  35.96 
 
 
315 aa  154  1e-36  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2572  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
312 aa  120  1.9999999999999998e-26  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008530  LGAS_1641  ABC-type sugar transport system, permease component  33.53 
 
 
287 aa  117  1.9999999999999998e-25  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.00000000401598  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  35.05 
 
 
321 aa  115  3e-25  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
310 aa  114  1.0000000000000001e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  35.68 
 
 
319 aa  112  4.0000000000000004e-24  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
313 aa  112  5e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  33.83 
 
 
317 aa  111  7.000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  35.68 
 
 
319 aa  111  7.000000000000001e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  35.26 
 
 
305 aa  110  2.0000000000000002e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
316 aa  110  2.0000000000000002e-23  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
319 aa  109  3e-23  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
316 aa  107  1e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  31.4 
 
 
313 aa  107  1e-22  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013595  Sros_7694  ABC transporter membrane spanning protein (sugar)  36.45 
 
 
312 aa  107  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal  0.6921 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  36.59 
 
 
291 aa  106  2e-22  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
311 aa  106  3e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013171  Apre_0253  binding-protein-dependent transport systems inner membrane component  31.64 
 
 
293 aa  105  5e-22  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
415 aa  105  7e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
417 aa  104  9e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  35.03 
 
 
287 aa  104  1e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
307 aa  103  2e-21  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  35.64 
 
 
307 aa  103  2e-21  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
300 aa  103  2e-21  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
294 aa  103  2e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  32.63 
 
 
293 aa  102  3e-21  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013235  Namu_0513  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
314 aa  102  4e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  30.11 
 
 
318 aa  102  6e-21  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  35.38 
 
 
321 aa  102  7e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  34.07 
 
 
314 aa  101  8e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
292 aa  101  9e-21  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
306 aa  101  1e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  32.11 
 
 
293 aa  100  1e-20  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
317 aa  100  1e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
306 aa  100  1e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  35.87 
 
 
309 aa  100  2e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
301 aa  100  2e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
309 aa  100  2e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
296 aa  99.8  3e-20  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1216  binding-protein-dependent transport systems inner membrane component  31.84 
 
 
315 aa  99.8  3e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  decreased coverage  0.00000228392  n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  28.43 
 
 
321 aa  99.8  3e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
316 aa  99.8  3e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
317 aa  99  4e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.13 
 
 
305 aa  99  5e-20  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
316 aa  98.6  6e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  29 
 
 
325 aa  98.6  6e-20  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  30.35 
 
 
305 aa  98.6  6e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
316 aa  98.2  8e-20  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
318 aa  98.2  9e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  28.79 
 
 
295 aa  98.2  9e-20  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.97 
 
 
300 aa  98.2  9e-20  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
320 aa  97.4  1e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  34.04 
 
 
317 aa  97.4  1e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_009636  Smed_2949  binding-protein-dependent transport systems inner membrane component  34.46 
 
 
302 aa  97.4  1e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.261022  normal 
 
 
-
 
NC_012669  Bcav_3614  binding-protein-dependent transport systems inner membrane component  31.19 
 
 
287 aa  97.1  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.484603  normal  0.727796 
 
 
-
 
NC_012669  Bcav_2264  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
307 aa  97.1  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.277747  normal 
 
 
-
 
NC_011369  Rleg2_1686  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
312 aa  96.7  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.746865  normal 
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  33.51 
 
 
313 aa  97.1  2e-19  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  33.15 
 
 
309 aa  96.3  3e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  31.77 
 
 
320 aa  96.3  3e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  35.47 
 
 
295 aa  95.9  5e-19  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_013205  Aaci_0796  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
312 aa  95.9  5e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.633875  n/a   
 
 
-
 
NC_012850  Rleg_1867  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
312 aa  95.5  6e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  33.16 
 
 
313 aa  95.5  6e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_013131  Caci_2030  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
297 aa  95.5  6e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.185813 
 
 
-
 
NC_009485  BBta_1755  ABC transporter permease  30.88 
 
 
312 aa  95.5  6e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.576454  normal  0.392142 
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  34.04 
 
 
322 aa  95.1  7e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  32.12 
 
 
304 aa  95.1  8e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  31.61 
 
 
293 aa  95.1  8e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  32.82 
 
 
328 aa  94.7  9e-19  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_012917  PC1_0126  glycerol-3-phosphate transporter permease  28.43 
 
 
295 aa  94.7  9e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  31.38 
 
 
293 aa  94.7  1e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013172  Bfae_01820  permease component of ABC-type sugar transporter  26.82 
 
 
312 aa  94.4  1e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4135  binding-protein-dependent transport systems inner membrane component  30.14 
 
 
293 aa  94.7  1e-18  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
293 aa  94.4  1e-18  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
319 aa  93.6  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  36.48 
 
 
314 aa  93.6  2e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3537  ABC transporter membrane spanning protein (galacturonic acid)  33.83 
 
 
322 aa  93.2  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601194  normal 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  30.26 
 
 
325 aa  93.2  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  31.52 
 
 
307 aa  94  2e-18  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  31.1 
 
 
318 aa  93.6  2e-18  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2145  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
362 aa  93.6  2e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3349  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
291 aa  93.6  2e-18  Variovorax paradoxus S110  Bacteria  normal  0.230089  n/a   
 
 
-
 
NC_013595  Sros_7172  sugar transport system (permease)  35.08 
 
 
323 aa  93.6  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0377247 
 
 
-
 
NC_012669  Bcav_1541  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
327 aa  93.6  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.128939 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  29.35 
 
 
293 aa  93.2  3e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2978  binding-protein-dependent transport systems inner membrane component  29.9 
 
 
289 aa  93.2  3e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
293 aa  93.2  3e-18  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
315 aa  93.2  3e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  31.94 
 
 
316 aa  93.2  3e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  35.87 
 
 
288 aa  93.2  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
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