More than 300 homologs were found in PanDaTox collection
for query gene Spro_2572 on replicon NC_009832
Organism: Serratia proteamaculans 568



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009832  Spro_2572  binding-protein-dependent transport systems inner membrane component  100 
 
 
312 aa  623  1e-177  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  43.51 
 
 
315 aa  263  3e-69  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  42.76 
 
 
314 aa  251  2e-65  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  42.76 
 
 
314 aa  251  2e-65  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  43.4 
 
 
292 aa  234  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  42.21 
 
 
336 aa  218  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  36.25 
 
 
316 aa  208  1e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4689  binding-protein-dependent transport systems inner membrane component  44.07 
 
 
298 aa  200  3e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.664924 
 
 
-
 
NC_013172  Bfae_06280  permease component of ABC-type sugar transporter  38.13 
 
 
303 aa  196  5.000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
313 aa  194  1e-48  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  34.09 
 
 
321 aa  194  1e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  37.67 
 
 
321 aa  186  4e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  36 
 
 
318 aa  186  6e-46  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  31.99 
 
 
318 aa  182  8.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
300 aa  181  1e-44  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
296 aa  179  4e-44  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
417 aa  178  1e-43  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_010483  TRQ2_0339  binding-protein-dependent transport systems inner membrane component  38.26 
 
 
420 aa  177  3e-43  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
415 aa  176  3e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  36.36 
 
 
300 aa  176  7e-43  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  36.1 
 
 
314 aa  175  9e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  37.55 
 
 
287 aa  174  9.999999999999999e-43  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
317 aa  174  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0321  binding-protein-dependent transport systems inner membrane component  37.39 
 
 
420 aa  174  1.9999999999999998e-42  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
309 aa  173  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  35.81 
 
 
313 aa  173  3.9999999999999995e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  36.43 
 
 
298 aa  172  6.999999999999999e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  36.16 
 
 
288 aa  171  2e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
310 aa  170  2e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
316 aa  170  3e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
307 aa  169  4e-41  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
292 aa  169  5e-41  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
309 aa  169  7e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  34.72 
 
 
317 aa  168  9e-41  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
315 aa  168  1e-40  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  37.7 
 
 
291 aa  167  2e-40  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013595  Sros_3537  ABC transporter membrane spanning protein (galacturonic acid)  35.07 
 
 
322 aa  166  5e-40  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601194  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  31.67 
 
 
310 aa  166  5.9999999999999996e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
311 aa  166  5.9999999999999996e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
316 aa  165  6.9999999999999995e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012669  Bcav_2833  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
319 aa  164  1.0000000000000001e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0200859  normal 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  33.56 
 
 
307 aa  164  1.0000000000000001e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  33.56 
 
 
307 aa  164  1.0000000000000001e-39  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
293 aa  165  1.0000000000000001e-39  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  33.92 
 
 
293 aa  164  2.0000000000000002e-39  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  33.82 
 
 
305 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
292 aa  163  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
316 aa  164  3e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  34.91 
 
 
275 aa  163  3e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.28 
 
 
295 aa  163  3e-39  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
298 aa  163  3e-39  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
299 aa  162  5.0000000000000005e-39  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
321 aa  162  5.0000000000000005e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
293 aa  162  9e-39  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  32.41 
 
 
319 aa  161  1e-38  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.46 
 
 
294 aa  161  1e-38  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.07 
 
 
320 aa  161  1e-38  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
283 aa  161  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  32.42 
 
 
315 aa  160  2e-38  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  32.41 
 
 
319 aa  161  2e-38  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
305 aa  160  3e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
295 aa  160  3e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
292 aa  160  3e-38  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
429 aa  159  4e-38  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
317 aa  160  4e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_012669  Bcav_1516  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
315 aa  160  4e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0640497  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
318 aa  160  4e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_010003  Pmob_0143  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
402 aa  160  4e-38  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
314 aa  159  6e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0395  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
436 aa  159  6e-38  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.89 
 
 
301 aa  159  7e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_009523  RoseRS_2895  binding-protein-dependent transport systems inner membrane component  32.47 
 
 
316 aa  158  1e-37  Roseiflexus sp. RS-1  Bacteria  normal  0.0497455  normal 
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
312 aa  157  2e-37  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  34.63 
 
 
294 aa  157  2e-37  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
308 aa  157  2e-37  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  33.86 
 
 
318 aa  157  2e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
300 aa  157  2e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
294 aa  156  4e-37  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0699  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
291 aa  156  4e-37  Dickeya dadantii Ech703  Bacteria  normal  0.216687  n/a   
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  34.75 
 
 
279 aa  156  5.0000000000000005e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
314 aa  156  5.0000000000000005e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
299 aa  155  8e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  32.49 
 
 
328 aa  154  1e-36  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  35.77 
 
 
293 aa  155  1e-36  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_31530  carbohydrate ABC transporter membrane protein  31.43 
 
 
313 aa  154  1e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.68002  normal 
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  28.71 
 
 
324 aa  154  1e-36  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6113  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
286 aa  155  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.453278  normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
320 aa  154  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  32.68 
 
 
323 aa  155  1e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  32.45 
 
 
305 aa  154  1e-36  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_008541  Arth_2946  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
316 aa  154  2e-36  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_11610  permease component of ABC-type sugar transporter  35.36 
 
 
311 aa  154  2e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.117578  normal  0.102082 
 
 
-
 
NC_011371  Rleg2_6525  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
286 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.728774  normal  0.302995 
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  32 
 
 
310 aa  154  2e-36  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  34.28 
 
 
310 aa  154  2e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
308 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  32 
 
 
310 aa  154  2.9999999999999998e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  31.03 
 
 
318 aa  153  2.9999999999999998e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.25 
 
 
309 aa  153  2.9999999999999998e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
316 aa  153  2.9999999999999998e-36  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>