Gene Ndas_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2034 
Symbol 
ID9245884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2455441 
End bp2456412 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content68% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003679966 
Protein GI297560992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.059557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.598754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCC TCCTGCAACG GCGGCCCGCC AAGGCCCCCG ACGCCCCGGC CGGCGCCAAG 
CCGCGCCGCA GGGTCGGCAA GAGCCCGGCC CCTGGCAAGC GGCGGAACGA GAACCTCGCC
GCCTACGGCT TCCTGGCCCC GTGGTTCGTC GGCCTGGTGC TCATCACCGC GGGCCCCCTC
CTGGCCTCCC TGTACTTCTC CTTCACCGAC TACAACCTCA TCGGCGACTA CGAGTGGGTC
GGCCTGGAGA ACTACCAGCG GATGTTCGAC GACGAGCGCC TGCACAGCGC GCTCAGGGTC
ACGTTCGTCT ACGTCTTCGT GTCGGTGCCG CTCCAGCTCG CCCTGGCCCT GGCCCTGGCC
ATGATCCTGG ACCGCGGCGT GCGGGGGCTG CCCCTGTACC GGTCGGTGTA CTACCTGCCC
TCCCTGCTCG GCGGCAGCGT GGCCATCGCC ATCCTGTGGC GCCAGGTCTT CGGCGCGGAG
GGCCTGATCA ACCAGGTGCT CGCCTTCTTC GGCATCCAGG GCGAGGGCTG GGTCTCCCAC
CCCGACTACG CGCTGGGCAC CCTGATCGTG CTCAACGTGT GGACCTTCGG CGCGCCCATG
GTGATCTTCC TGGCGGGTCT GCGCCAGATC CCCGCCATGT ACTACGAGGC CGCCGCGGTG
GACGGGGCGG GCCCCCTGCG CCGCTTCTGG AACATCACCG TGCCGATGCT CACCCCGATC
ATCTTCTTCA ACATGGTGCT GCAGTTCATC AACGCCTTCC AGACCTTCAC CCAGGCGTTC
GTGGTCAGCG GCGGCACCGG CGGCCCCTCG GACTCCACGC TCTTCTACAC GCTCTACCTC
TACCTGCGCG GTTTCGGCTC CTTCGACATG GGCTACGCCT CGGCGATGGC CTGGCTGCTG
CTGCTGATCA TCGGCGGGTT CACCGCGGTG AACTTCATCG CCTCCAAGTA CTGGGTCTTC
TATGGCGACT AA
 
Protein sequence
MSALLQRRPA KAPDAPAGAK PRRRVGKSPA PGKRRNENLA AYGFLAPWFV GLVLITAGPL 
LASLYFSFTD YNLIGDYEWV GLENYQRMFD DERLHSALRV TFVYVFVSVP LQLALALALA
MILDRGVRGL PLYRSVYYLP SLLGGSVAIA ILWRQVFGAE GLINQVLAFF GIQGEGWVSH
PDYALGTLIV LNVWTFGAPM VIFLAGLRQI PAMYYEAAAV DGAGPLRRFW NITVPMLTPI
IFFNMVLQFI NAFQTFTQAF VVSGGTGGPS DSTLFYTLYL YLRGFGSFDM GYASAMAWLL
LLIIGGFTAV NFIASKYWVF YGD