| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_2572 |
|---|
| Symbol | |
|---|
| ID | 5604499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 2828672 |
|---|
| End bp | 2829610 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640938111 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001478801 |
|---|
| Protein GI | 157370812 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGG CAGAAAGCTA CGGTGCCCTA AAACAACAAA AAAGTACCCC ACGACCCGCA
CTCAGCCGCC TGGAGCGTGC CGAGCGTTTC TGGGGCTGGG TGATGATCTT GCCGTTGCTG
ATTGGTTTGA CGGTGTTTTA CCTGGTCCCC TTTTTACAGA ACATCTTTTA CAGTTTTACC
GACCTCAACC AATTTATGCG CTGGAGCACC CTCAGCGTCG ATAACTACGT CAATCTGTTT
GAAGACGACG ACTTTTACAC CGCCGCCGGC AATACGCTGT TCTATGTGGT GGTGTGTGTC
CCCGTCAGCC TGAGCCTGTC GCTGCTGCTG GCGATTGGCC TGAACCAGAA CATTCGCGGC
AAGGCGCTGC TGCGCACCCT GCTGTTCTTG CCGGCGGTCA CCATGCCTGC CGCCGTGGCG
ATGGTCTGGC AATGGCTGTT CAACAAGGAT TTCGGTCTGA TCAACCAGGC GATTGGCCTG
CTGGGGATTT CGCCGGTGGC CTGGCTGTCC GACCCGGACG TGGTGCGCAT CAGCGTTTCC
ATCATCATTA TCTGGTCGTC GCTGGCGTTG AAAATCATCA TTTTACTGGC CGGGTTACAA
AGCATTCCAC GTCAACTGTA TGAGGCCGCC GACATTGACG GTATCAGCAC CCTGCGCCGC
TTCTTTTGCA TCACCCTGCC GATGATGGTG CCAACGCTGT TCTTCGTTTC GGTGATGAGC
TTTATCGAGA TCCTGCAAAT ATTCGACGTG GTGTTCCTGA TGTTCGACCG CGCGTTGGTG
GAAAGCGACG TGATGACCGT CACCAACCTG TTTTACAAGT ATGCCTTTTA CCTGCAGGAG
AAAGGTTACG CCTCCGCCAT CACCGTGGTG CTGTTCGCCG TCACCCTGCT GATCACCCTG
ATTCAAATGA TGATTGGCAA ACGCCTGAAA GTCAGCTGA
|
|---|
| Protein sequence | MSLAESYGAL KQQKSTPRPA LSRLERAERF WGWVMILPLL IGLTVFYLVP FLQNIFYSFT
DLNQFMRWST LSVDNYVNLF EDDDFYTAAG NTLFYVVVCV PVSLSLSLLL AIGLNQNIRG
KALLRTLLFL PAVTMPAAVA MVWQWLFNKD FGLINQAIGL LGISPVAWLS DPDVVRISVS
IIIIWSSLAL KIIILLAGLQ SIPRQLYEAA DIDGISTLRR FFCITLPMMV PTLFFVSVMS
FIEILQIFDV VFLMFDRALV ESDVMTVTNL FYKYAFYLQE KGYASAITVV LFAVTLLITL
IQMMIGKRLK VS
|
|---|
| |