More than 300 homologs were found in PanDaTox collection
for query gene Bfae_05100 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_05100  permease component of ABC-type sugar transporter  100 
 
 
316 aa  620  1e-177  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06280  permease component of ABC-type sugar transporter  52.53 
 
 
303 aa  315  6e-85  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7905  binding-protein-dependent transport systems inner membrane component  45.85 
 
 
336 aa  281  1e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  46.1 
 
 
318 aa  264  2e-69  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013595  Sros_4987  binding-protein-dependent transport systems inner membrane component  46.59 
 
 
292 aa  248  8e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.753078  normal 
 
 
-
 
NC_013131  Caci_4689  binding-protein-dependent transport systems inner membrane component  47.6 
 
 
298 aa  238  6.999999999999999e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.664924 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  43.57 
 
 
315 aa  233  4.0000000000000004e-60  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  43.71 
 
 
314 aa  226  4e-58  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  43.71 
 
 
314 aa  226  4e-58  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2165  sugar ABC transporter  57.53 
 
 
216 aa  204  2e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009832  Spro_2572  binding-protein-dependent transport systems inner membrane component  36.45 
 
 
312 aa  184  1.0000000000000001e-45  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
320 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  38.28 
 
 
307 aa  176  5e-43  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
307 aa  176  5e-43  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
306 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_28370  carbohydrate ABC transporter membrane protein  36.5 
 
 
287 aa  172  1e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.096742  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
291 aa  168  1e-40  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012669  Bcav_0828  binding-protein-dependent transport systems inner membrane component  33.69 
 
 
316 aa  162  1e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.194369 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.25 
 
 
296 aa  160  2e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  36.65 
 
 
292 aa  161  2e-38  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
295 aa  160  3e-38  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_013946  Mrub_0044  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
304 aa  159  4e-38  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
306 aa  160  4e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  40.35 
 
 
287 aa  159  5e-38  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  33.21 
 
 
300 aa  159  5e-38  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3142  binding-protein-dependent transport systems inner membrane component  30.74 
 
 
325 aa  159  6e-38  Arthrobacter sp. FB24  Bacteria  normal  0.406302  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  32.88 
 
 
309 aa  158  1e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009972  Haur_3640  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
298 aa  157  3e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
308 aa  157  3e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  34.41 
 
 
313 aa  156  4e-37  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  32.01 
 
 
294 aa  156  4e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  36.54 
 
 
305 aa  156  4e-37  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
321 aa  156  5.0000000000000005e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007802  Jann_2587  binding-protein-dependent transport systems inner membrane component  34.7 
 
 
314 aa  155  7e-37  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.000137508  normal 
 
 
-
 
NC_010001  Cphy_0290  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
297 aa  155  7e-37  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  32.91 
 
 
321 aa  155  9e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
292 aa  154  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
305 aa  155  1e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
295 aa  154  2e-36  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_009380  Strop_1558  binding-protein-dependent transport systems inner membrane component  35.31 
 
 
322 aa  154  2e-36  Salinispora tropica CNB-440  Bacteria  normal  0.946878  normal  0.637369 
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
300 aa  154  2e-36  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
318 aa  153  2.9999999999999998e-36  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_012669  Bcav_0555  binding-protein-dependent transport systems inner membrane component  33.54 
 
 
328 aa  153  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.913769 
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
293 aa  153  4e-36  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
314 aa  152  5e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
310 aa  152  8e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  32.06 
 
 
293 aa  152  8e-36  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
318 aa  152  8e-36  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_013131  Caci_3807  binding-protein-dependent transport systems inner membrane component  36.19 
 
 
316 aa  151  1e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.922708  normal  0.915782 
 
 
-
 
NC_011071  Smal_2682  binding-protein-dependent transport systems inner membrane component  34.49 
 
 
293 aa  152  1e-35  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.990678  normal 
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  33.44 
 
 
313 aa  151  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
317 aa  150  3e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
309 aa  150  4e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
294 aa  150  4e-35  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1507  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
323 aa  150  4e-35  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000203032 
 
 
-
 
NC_013172  Bfae_19290  carbohydrate ABC transporter membrane protein  34.18 
 
 
328 aa  149  5e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0926617  n/a   
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  32.92 
 
 
320 aa  149  5e-35  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  35.74 
 
 
283 aa  149  8e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
314 aa  148  9e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0935  multiple sugar transport system permease protein  31.49 
 
 
328 aa  148  1.0000000000000001e-34  Thermobifida fusca YX  Bacteria  normal  0.36894  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.26 
 
 
301 aa  148  1.0000000000000001e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
308 aa  148  1.0000000000000001e-34  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
415 aa  148  1.0000000000000001e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_013595  Sros_3307  sugar transport system (permease)  33.33 
 
 
325 aa  147  2.0000000000000003e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.175437 
 
 
-
 
NC_013946  Mrub_2532  binding-protein-dependent transport systems inner membrane component  34.32 
 
 
417 aa  147  2.0000000000000003e-34  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.636087 
 
 
-
 
NC_012880  Dd703_0068  binding-protein-dependent transport systems inner membrane component  31.75 
 
 
315 aa  147  2.0000000000000003e-34  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1786  binding-protein-dependent transport systems inner membrane component  30.72 
 
 
335 aa  147  3e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0186858  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
314 aa  146  4.0000000000000006e-34  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
306 aa  146  4.0000000000000006e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  34.8 
 
 
317 aa  146  5e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_012854  Rleg_6527  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
307 aa  145  6e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0292278 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  32.55 
 
 
314 aa  145  6e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
318 aa  145  9e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
318 aa  145  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_009616  Tmel_1616  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
429 aa  144  1e-33  Thermosipho melanesiensis BI429  Bacteria  normal  0.225919  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  31.91 
 
 
275 aa  145  1e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1443  ABC sugar transporter, inner membrane subunit  33.92 
 
 
303 aa  144  2e-33  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0903613  n/a   
 
 
-
 
NC_009049  Rsph17029_0092  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
296 aa  144  2e-33  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3565  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
316 aa  144  3e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.702273  normal  0.0136241 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.48 
 
 
299 aa  143  3e-33  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  33.45 
 
 
294 aa  143  4e-33  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_013521  Sked_00810  permease component of ABC-type sugar transporter  34.28 
 
 
305 aa  143  5e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0124807  normal  0.184811 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
311 aa  142  6e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  36.59 
 
 
301 aa  142  6e-33  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
312 aa  142  6e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
300 aa  142  7e-33  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1529  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
318 aa  142  8e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.165529  normal  0.149292 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
310 aa  142  8e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2465  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
296 aa  142  9e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  0.603266  normal  0.170133 
 
 
-
 
NC_014151  Cfla_2400  binding-protein-dependent transport systems inner membrane component  32.09 
 
 
338 aa  141  9.999999999999999e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00254991 
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  34.19 
 
 
312 aa  141  9.999999999999999e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_013526  Tter_2645  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
311 aa  141  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
311 aa  141  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
305 aa  142  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  35.13 
 
 
324 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4135  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
302 aa  140  1.9999999999999998e-32  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  36.16 
 
 
316 aa  140  1.9999999999999998e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2734  binding-protein-dependent transport systems inner membrane component  33.12 
 
 
308 aa  141  1.9999999999999998e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.172129  normal  0.124427 
 
 
-
 
NC_012669  Bcav_1506  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
319 aa  140  3e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.172357  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  31.82 
 
 
294 aa  140  3e-32  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
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