| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7694 |
|---|
| Symbol | |
|---|
| ID | 8671016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8494140 |
|---|
| End bp | 8495078 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter membrane spanning protein (sugar) |
|---|
| Protein accession | YP_003343108 |
|---|
| Protein GI | 271968912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.753078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.6921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGTCG TCACCCCGGC GCGCCCCGCC GCGAAGACCC GGTCCGCACG CGCGGCGACG
CGCGTGCGGA ACCGGGACGG CTGGTGGGCC ACGCTGTTCC TCGCTCCGCA GGTCCTCGGC
CTGCTGGCGT TCCTGGTCTT CCCGCTCGGG TTCGCGGTCG TGCTCGCGTT CATGAAGTGG
GACGGGCTCG GCGAGAAGTC CTGGGCCGGC TTCGACAACT TCGCCGCCCA GCTCTCCGAC
CCCGCCTTCG GCACGGCCGT CTGGAACACC GTCAAGCTCG CCTTCCTGAC GGTCCCGGTC
GGCCTGGCGC TCGCGCTGCT CATCGCCCTC GCGCTGAACC AGGTCAGGGG CAAGACCTTC
TACCGGGTCG TCTATTTCCT GCCGGTGGTC ACCAGCTCGG TGGCGGTGGC CGTGATGTGG
CAGGTCATCC TGGCCAGCGG CGACTACGGC GTCCTCAACA GGACCGTGCA CGACTGGTTC
GGGATCGCGC TGCCCGACTG GCTTGAGGAC CCGGGCTGGG TCATCGTGGC CATCGCGGTC
GTGACCATCT GGTCCTCGCT CGGCCTCAAC GTCGTGATCT TCCTGGCCGG GCTGCAGACC
ATCCCGCCCG CCCTGATGGA GGCCGCCCGC ATCGACGGGG CGGGCCCGAT CCGCATCTTC
CGCTCGGTGA CACTGCCCAT GATCTCCCCG ACCGTCTTCT TCTCCACCGT GGTCGCGGTG
ATCAGCTCGT TCCAGGCGTT CGACCAGATC TACGTGCTGG TCGACCCCGA CCACAACGAC
GGCGCCCGCA CGATCGTCTA CCAGATCTAC GACCTGGGCT TCAAGAACTT CGAGTTCGGC
ATGAGCAGCG CCGCCGCGCT GATCCTGCTC GCACTGACGC TGCTCGTCAC CCTCGTCCAG
TTCGGAGTGC AGAAGCGCTT CGTCCACTAC GACTCCTAA
|
|---|
| Protein sequence | MGVVTPARPA AKTRSARAAT RVRNRDGWWA TLFLAPQVLG LLAFLVFPLG FAVVLAFMKW
DGLGEKSWAG FDNFAAQLSD PAFGTAVWNT VKLAFLTVPV GLALALLIAL ALNQVRGKTF
YRVVYFLPVV TSSVAVAVMW QVILASGDYG VLNRTVHDWF GIALPDWLED PGWVIVAIAV
VTIWSSLGLN VVIFLAGLQT IPPALMEAAR IDGAGPIRIF RSVTLPMISP TVFFSTVVAV
ISSFQAFDQI YVLVDPDHND GARTIVYQIY DLGFKNFEFG MSSAAALILL ALTLLVTLVQ
FGVQKRFVHY DS
|
|---|
| |