More than 300 homologs were found in PanDaTox collection
for query gene Gobs_3810 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_3810  acyl-CoA dehydrogenase domain protein  100 
 
 
386 aa  775    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.492901  n/a   
 
 
-
 
NC_009719  Plav_0924  acyl-CoA dehydrogenase domain-containing protein  56.91 
 
 
383 aa  410  1e-113  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3917  acyl-CoA dehydrogenase domain-containing protein  56.51 
 
 
381 aa  407  1.0000000000000001e-112  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0198331  normal 
 
 
-
 
NC_013757  Gobs_3772  acyl-CoA dehydrogenase domain protein  56.2 
 
 
378 aa  405  1.0000000000000001e-112  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.717662  n/a   
 
 
-
 
NC_009338  Mflv_5166  Fis family transcriptional regulator  57.87 
 
 
382 aa  402  1e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.170532 
 
 
-
 
NC_008726  Mvan_2876  acyl-CoA dehydrogenase domain-containing protein  56.76 
 
 
383 aa  402  1e-111  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0157602  normal 
 
 
-
 
NC_007953  Bxe_C0605  putative acyl-CoA dehydrogenase  57.3 
 
 
382 aa  399  9.999999999999999e-111  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00592793  normal  0.0752366 
 
 
-
 
NC_013441  Gbro_0907  acyl-CoA dehydrogenase domain protein  55.56 
 
 
374 aa  393  1e-108  Gordonia bronchialis DSM 43247  Bacteria  normal  0.731697  n/a   
 
 
-
 
NC_007974  Rmet_5357  putative acyl-CoA dehydrogenase  54.2 
 
 
383 aa  382  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  0.0369214  normal 
 
 
-
 
NC_011992  Dtpsy_0079  acyl-CoA dehydrogenase domain protein  53.58 
 
 
380 aa  376  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3260  acyl-CoA dehydrogenase domain-containing protein  54.09 
 
 
383 aa  377  1e-103  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1895  acyl-CoA dehydrogenase domain-containing protein  54.59 
 
 
383 aa  374  1e-102  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0271  acyl-CoA dehydrogenase-like  49.1 
 
 
386 aa  366  1e-100  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.360882 
 
 
-
 
NC_007778  RPB_0558  Acyl-CoA dehydrogenase-like  49.35 
 
 
386 aa  362  5.0000000000000005e-99  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.58726  normal  0.0406105 
 
 
-
 
NC_008254  Meso_3278  acyl-CoA dehydrogenase-like  51.04 
 
 
383 aa  362  5.0000000000000005e-99  Chelativorans sp. BNC1  Bacteria  normal  0.827107  n/a   
 
 
-
 
NC_011004  Rpal_0482  acyl-CoA dehydrogenase domain protein  48.58 
 
 
386 aa  361  9e-99  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708423  n/a   
 
 
-
 
NC_013510  Tcur_2499  acyl-CoA dehydrogenase domain protein  52.88 
 
 
371 aa  361  1e-98  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000304997  n/a   
 
 
-
 
NC_009485  BBta_7535  putative acyl-CoA dehydrogenase  49.87 
 
 
385 aa  360  3e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0213  acyl-CoA dehydrogenase-like protein  53.48 
 
 
385 aa  358  8e-98  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0223  acyl-CoA dehydrogenase domain-containing protein  53.48 
 
 
408 aa  358  9.999999999999999e-98  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4154  acyl-CoA dehydrogenase domain-containing protein  53.87 
 
 
384 aa  357  1.9999999999999998e-97  Mycobacterium sp. JLS  Bacteria  normal  0.041099  normal  0.843392 
 
 
-
 
NC_007336  Reut_C6298  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.39 
 
 
379 aa  356  3.9999999999999996e-97  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0203  acyl-CoA dehydrogenase domain-containing protein  53.21 
 
 
385 aa  355  5e-97  Mycobacterium sp. JLS  Bacteria  normal  normal  0.672211 
 
 
-
 
NC_010002  Daci_0088  acyl-CoA dehydrogenase domain-containing protein  51.88 
 
 
385 aa  356  5e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.745656  normal 
 
 
-
 
NC_007509  Bcep18194_C7127  Acyl-CoA dehydrogenase  50.91 
 
 
385 aa  355  5.999999999999999e-97  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3557  Acyl-CoA dehydrogenase, central region  51.15 
 
 
386 aa  353  2e-96  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5144  putative acyl-CoA dehydrogenase  50.91 
 
 
385 aa  350  3e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.16071 
 
 
-
 
NC_007348  Reut_B4563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  49.74 
 
 
387 aa  349  5e-95  Ralstonia eutropha JMP134  Bacteria  normal  0.131003  n/a   
 
 
-
 
NC_007953  Bxe_C0207  putative acyl-CoA dehydrogenase  52.31 
 
 
387 aa  349  5e-95  Burkholderia xenovorans LB400  Bacteria  normal  0.698342  normal  0.648676 
 
 
-
 
NC_007952  Bxe_B2737  putative acyl-CoA dehydrogenase  50.9 
 
 
385 aa  348  1e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3274  acyl-CoA dehydrogenase domain-containing protein  51.17 
 
 
399 aa  343  4e-93  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.220833 
 
 
-
 
NC_008048  Sala_1240  acyl-CoA dehydrogenase-like protein  49.74 
 
 
640 aa  339  4e-92  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.485103  normal 
 
 
-
 
NC_009427  Saro_3624  acyl-CoA dehydrogenase domain-containing protein  50.26 
 
 
381 aa  338  8e-92  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4074  acyl-CoA dehydrogenase-like protein  50 
 
 
386 aa  338  9.999999999999999e-92  Cupriavidus metallidurans CH34  Bacteria  normal  0.0382192  normal 
 
 
-
 
NC_008782  Ajs_0061  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
385 aa  330  4e-89  Acidovorax sp. JS42  Bacteria  normal  0.957206  normal 
 
 
-
 
NC_008786  Veis_4040  acyl-CoA dehydrogenase domain-containing protein  49.1 
 
 
410 aa  326  5e-88  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.572322  normal 
 
 
-
 
NC_013595  Sros_8197  acyl-CoA dehydrogenase protein  39.37 
 
 
384 aa  197  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1850  acyl-CoA dehydrogenase domain-containing protein  35.89 
 
 
396 aa  196  4.0000000000000005e-49  Sphingomonas wittichii RW1  Bacteria  normal  0.441994  normal 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  34.96 
 
 
415 aa  195  1e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  37.14 
 
 
398 aa  193  4e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
400 aa  192  1e-47  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  38.66 
 
 
386 aa  191  2e-47  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  35.06 
 
 
415 aa  191  2e-47  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  34.96 
 
 
385 aa  191  2.9999999999999997e-47  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  33.16 
 
 
393 aa  187  2e-46  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  35.96 
 
 
398 aa  187  2e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  33.24 
 
 
415 aa  186  6e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  33.52 
 
 
414 aa  186  6e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  35.67 
 
 
398 aa  186  6e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  35.67 
 
 
398 aa  186  6e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.67 
 
 
398 aa  186  7e-46  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  42.46 
 
 
386 aa  185  1.0000000000000001e-45  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  34.43 
 
 
393 aa  185  1.0000000000000001e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  33.52 
 
 
414 aa  184  3e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  35.67 
 
 
398 aa  184  3e-45  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6850  acyl-CoA dehydrogenase domain-containing protein  36.49 
 
 
378 aa  183  4.0000000000000006e-45  Frankia sp. EAN1pec  Bacteria  normal  0.290885  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  35.39 
 
 
398 aa  183  6e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_007517  Gmet_2199  Acyl-CoA dehydrogenase-like  33.93 
 
 
388 aa  182  9.000000000000001e-45  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000079384  hitchhiker  0.00524222 
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  34.67 
 
 
415 aa  182  1e-44  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  34.44 
 
 
399 aa  182  1e-44  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
398 aa  181  1e-44  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  34.38 
 
 
415 aa  181  1e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
398 aa  181  2e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  31.99 
 
 
396 aa  181  2e-44  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2517  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
395 aa  181  2e-44  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2790  acyl-CoA dehydrogenase domain-containing protein  35.57 
 
 
743 aa  181  2e-44  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4761  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
387 aa  181  2.9999999999999997e-44  Mycobacterium sp. KMS  Bacteria  normal  0.950594  normal 
 
 
-
 
NC_008146  Mmcs_4675  acyl-CoA dehydrogenase-like protein  35.01 
 
 
387 aa  181  2.9999999999999997e-44  Mycobacterium sp. MCS  Bacteria  normal  0.448802  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  31.99 
 
 
396 aa  180  4e-44  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  34.75 
 
 
413 aa  180  4e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_009077  Mjls_5060  acyl-CoA dehydrogenase domain-containing protein  36.99 
 
 
387 aa  180  4.999999999999999e-44  Mycobacterium sp. JLS  Bacteria  normal  0.714933  normal  0.840022 
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
393 aa  179  5.999999999999999e-44  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  36.23 
 
 
432 aa  179  7e-44  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  36.2 
 
 
397 aa  179  8e-44  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1468  Acyl-CoA dehydrogenase  35.51 
 
 
716 aa  179  1e-43  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  34.4 
 
 
399 aa  178  1e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13538  acyl-CoA dehydrogenase fadE26  36.93 
 
 
400 aa  177  2e-43  Mycobacterium tuberculosis F11  Bacteria  normal  0.0408741  hitchhiker  0.000000336026 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  32.83 
 
 
402 aa  177  2e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  32.83 
 
 
402 aa  178  2e-43  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  34.57 
 
 
414 aa  177  2e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  32.83 
 
 
402 aa  178  2e-43  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  38.68 
 
 
398 aa  177  3e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  32.59 
 
 
393 aa  177  3e-43  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  33.09 
 
 
401 aa  177  3e-43  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_013131  Caci_2176  acyl-CoA dehydrogenase domain protein  34.78 
 
 
396 aa  177  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.22711  normal 
 
 
-
 
NC_009953  Sare_2808  acyl-CoA dehydrogenase domain-containing protein  35.79 
 
 
401 aa  177  3e-43  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000244181 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  33.58 
 
 
393 aa  177  4e-43  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  35.11 
 
 
398 aa  177  4e-43  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5256  acyl-CoA dehydrogenase domain-containing protein  33.59 
 
 
387 aa  177  4e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.34656 
 
 
-
 
NC_009511  Swit_3317  acyl-CoA dehydrogenase domain-containing protein  36.48 
 
 
390 aa  176  4e-43  Sphingomonas wittichii RW1  Bacteria  normal  0.757034  hitchhiker  0.0000492573 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  34.84 
 
 
397 aa  176  5e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  35.49 
 
 
398 aa  176  6e-43  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  32.6 
 
 
403 aa  176  6e-43  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_009380  Strop_2609  acyl-CoA dehydrogenase domain-containing protein  35.73 
 
 
401 aa  176  7e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  32.6 
 
 
403 aa  176  8e-43  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3643  acyl-CoA dehydrogenase domain protein  35.9 
 
 
390 aa  176  9e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  0.100578  n/a   
 
 
-
 
NC_013441  Gbro_3955  acyl-CoA dehydrogenase domain protein  35.03 
 
 
400 aa  176  9e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  0.888919  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  32.27 
 
 
402 aa  175  9.999999999999999e-43  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  33.92 
 
 
398 aa  175  9.999999999999999e-43  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  33.58 
 
 
393 aa  175  9.999999999999999e-43  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>