Gene BBta_5149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5149 
Symbol 
ID5151094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5381606 
End bp5382787 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content63% 
IMG OID640559924 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_001241051 
Protein GI148256466 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.195919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0612186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA AGCTGTCGAA GGAAGACGCG GCGTTCCGCG ATGAGGTTCG CGCCTTCATC 
GCGGAAAACT ATCCGGCCGA GATGCGCGTG CCGAATCCGG AGACGGATCT CACCAAGGAG
CAGTCGCTGC TGTGGCATCG CATCCTGTAT CGCAAGGGAT GGATTGCACC GCTCTGGCCG
AAGGAATATG GCGGTCCGGG CTGGTCGATC ACGCAGCGCT TCATCTTCGA GCAGGAGACC
TCGCGCGCCG GCACGCTGCC GCCGCTCGCT TTCAGCGTCA CCATGGTCGG ACCGGTGATC
TACACCTTCG GCAATGCGGC ACAGAAGGCC AGGTTTCTGC CGCGCATTCT CTCCGGCGAG
GACTGGTGGT GCCAGGGCTA TTCGGAGCCG GGGGCCGGCT CCGATCTTGC CGCGGTGCGC
ACAAGGGCGG TGCGCGACGG CGATCATTAC GTCGTCAACG GTCACAAGAC CTGGACCACG
CTGGCGCAGC ATGCCGACTG GATCTTCTGC CTGGTGCGGA CGGATCCCGC CGCCAAGCCG
CAGGCGGGCA TTTCGTTTCT GCTGATCGAC ATGAAGACGC CCGGCGTGAC CGTCCGTCCG
ATCATCACCA TCGACGGTTC GCACGAGGTC AACGACGTCT TTCTCGAGGA TGTCCGCGTC
CCTGTGGAGA ACCTGATCGG CGAGGAAAAC AAGGGCTGGA CCTATGCCAA GTTCCTGCTG
GGCAATGAGC GCACCAGCAT GGCCGGCATC GGCCGCTCGA CCCGCTACCT GCAGCGGCTG
AAGCAGATCG TCAAAAGCGA GATCGCCGAA GACGATCCCA CATATCGAGA TTTCATCAGG
GAGATCGCGC GGGTCGAGCT CGATCTGCTC GCGCTGGAGG CGACCGAGCT GCGCATCGTC
GCGCAGATGG CGCGCGGCAT CGATCCTGGC CCTGCGGCGT CGCTGTTCAA GATCCGGGGC
ACCGAGATTT TCCAGCGCAT CACCGAATTG ACGCATCAGG CGATCGGCAA TGACGGGCTG
GCGCTGCGCG AGCAGCCGTC CAGCGCCAAC CGGTTTATGC CCGGGCCTGA CTACGGCCAC
ACCGCGACCG AGAAATATCT CAACGCGCGC AAGCTCAGCA TCTACGGCGG ATCGAACGAG
ATCCAGCACA ACATTATCGC GAAAGCGGTC CTCGGTCTCT GA
 
Protein sequence
MELKLSKEDA AFRDEVRAFI AENYPAEMRV PNPETDLTKE QSLLWHRILY RKGWIAPLWP 
KEYGGPGWSI TQRFIFEQET SRAGTLPPLA FSVTMVGPVI YTFGNAAQKA RFLPRILSGE
DWWCQGYSEP GAGSDLAAVR TRAVRDGDHY VVNGHKTWTT LAQHADWIFC LVRTDPAAKP
QAGISFLLID MKTPGVTVRP IITIDGSHEV NDVFLEDVRV PVENLIGEEN KGWTYAKFLL
GNERTSMAGI GRSTRYLQRL KQIVKSEIAE DDPTYRDFIR EIARVELDLL ALEATELRIV
AQMARGIDPG PAASLFKIRG TEIFQRITEL THQAIGNDGL ALREQPSSAN RFMPGPDYGH
TATEKYLNAR KLSIYGGSNE IQHNIIAKAV LGL