| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3278 |
|---|
| Symbol | |
|---|
| ID | 4183074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3542705 |
|---|
| End bp | 3543856 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638069171 |
|---|
| Product | acyl-CoA dehydrogenase-like |
|---|
| Protein accession | YP_675814 |
|---|
| Protein GI | 110635606 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.827107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACA GTTTTCGTCT GGACACGTCA AAGCTCCCAC CCGCGCTTGA AACTCTCCGC
GAGGAGGTCC GCGATTTCAT CGAGTCCGAA AGAAGGGAGG GATCCTTCAC CATCGGGCCA
GGGGGATGGC AGCGCTATGA CCGCAGCCTC AGCATGAAAA TTGGCGCCAA AGGCTGGATC
GGAATGACCT GGCCGAAGCG CTACGGAGGC CACGAGCGGA GCGCCATGGA GCGTTACGTA
GTGACAGAAG AACTACTGGC CGCCGGCATG CCATTGCGTG CTCACTGGGT GGGCGACCGG
CAGATCGGCC CGAACCTCCT GAAATTCGGC ACCGAGGAAC AAAAGTCGTC CATACTTCCA
CGGATTGCAC GCGGTGAGCT TTCCTTTTGT GTCGGACTAA GCGAGCCGGA TTCCGGCTCC
GACCTCGCTT CCATCCGCAG CCGCGCCATT GAGGTGGATG GTGGCTGGCG GGTGCAGGGG
ACGAAAATCT GGCAGAGCAT CGCGCACAAG GCCGAGTACA TGACGCTGTT CGTGCGGACC
TCCCCACTGG GAGAGAACAA GCACGAGGGC ATCAGCCAGT TTCTGGTCGA CATGACCTCG
CCAGGAATCT CCGTACGCCC GATCATCAAT CTCGTCGGTG AGCACGATTT CAACGAGGTG
CACTTCGAGG ACGTCTTCGT TCCCGACAGT GCGGTGATCG GGACGATCGG CAACGGCTGG
AACCAAGTTT CAGGTGAACT CGCCTATGAG CGATCGGGCG CGGACCGCTG GTTTGGCACT
TTCGACGTCT TCGCCGCCGG GGTCGACCGT ACTGCGGAGG GCGCTGAGAA CGAATGTGCG
ATCGGCCGGC TGGCCGCCCA GTTCTGGACA TTGCACCGCA TGTCGCTCGG CATCGCCCAA
ATGCTTGAAG AAGGCGTCAC CCCCAATGTT GAGGCGGCGC TGGTGAAGGA CCTTGCGACA
AATTTCGATC AGGAGATTCC GGCCGTGCTG CGCCAGGTGG TCCCGGCGGA CGCGCGGGCG
CGCTTGCCCG AAGACGATCC TTTTCCCGCT ATGCTCGACC ATGCGCTGAA GTTTGCTCCG
GCGCTTACGA TCAAAGGCGG CACGAAGGAG ATCCTGCGCG GCATCATTGC CAGAGGGCTG
GGGTTGAGAT GA
|
|---|
| Protein sequence | MLHSFRLDTS KLPPALETLR EEVRDFIESE RREGSFTIGP GGWQRYDRSL SMKIGAKGWI
GMTWPKRYGG HERSAMERYV VTEELLAAGM PLRAHWVGDR QIGPNLLKFG TEEQKSSILP
RIARGELSFC VGLSEPDSGS DLASIRSRAI EVDGGWRVQG TKIWQSIAHK AEYMTLFVRT
SPLGENKHEG ISQFLVDMTS PGISVRPIIN LVGEHDFNEV HFEDVFVPDS AVIGTIGNGW
NQVSGELAYE RSGADRWFGT FDVFAAGVDR TAEGAENECA IGRLAAQFWT LHRMSLGIAQ
MLEEGVTPNV EAALVKDLAT NFDQEIPAVL RQVVPADARA RLPEDDPFPA MLDHALKFAP
ALTIKGGTKE ILRGIIARGL GLR
|
|---|
| |