Gene BBta_7116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7116 
Symbol 
ID5153609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7457314 
End bp7458561 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID640561793 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_001242904 
Protein GI148258319 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG ATGACACTCC GCAGGAAGCC GCCTTTCGCG AGACCGCGCG TGCCTGGGTC 
GCAGCCAATG CGCCGAAGGA CCTCGAGGCG GAGCTGGCGA GTTCCTCGCT CGGGCGCATC
CGGCTCAAGC ATGCCGATAT CGTCGAGGTC GGCAAGGCCT GGCAGAAGAA GAAGGCCGAG
GGCGGCTGGG CCTGTCTGCA CTGGCCAAGG GAGTATGGCG GCCGCGGCGC CACGCCGATC
GAGCGGGTCA TCTGGCAGCA GGAGGAGGGC GTCTACGGCA AGCTGACGCA GCCGTTCCAG
ATCGGCGAGG GCATGTGCGG CCCGACGGTG ATGGCCTATG GCAGCGAGGC GCACAAGCGG
CGCTACCTGC CGAAGCTCGC CTCCGGCGAG GAGATCTGGT GCCAACTGTT CTCCGAGCCC
GCCGGCGGCT CGGATGTCGC GGGCCTGCGC ACCCGCGCTG AGCAGCGCGG CGATGACTGG
ATCATCAACG GCCAGAAGAT CTGGACCTCG GGCGCGCACT ACTCCGATTA CGGCCTCCTG
ATCACGCGCA CCGACCCCAA CGTGCCCAAG CACAAGGGTC TGACGATGTT CTTCCTGGAC
ATGAAAAGTC CCGGCGTCGA GGTCCGCCCG ATCAAGCAGG CCAACGGCAT GCAGGAGTTC
AACGAGGTCT ATTTCACCGA CGTGGTGATC CCGGACAGTC AGCGCCTCGG CGCGGTCGGT
GATGGCTGGA ACGTGTCGCT GACCACCTTG ATGAACGAGC GCATGTCGAT CGGTGCAAGG
CTCGCCACTG GCTTCCCAGA AATCTTCGAG TTCTGCACCA ACCTGATGAC CGACAACGGG
CTTGCGATCG ACGATCGCGC CACGCGCTCC AAGCTGGCGT CCTGGGCGGT GAAGGCGAGC
GGGCTGAAAT ACACCAGCTA CCGCGCGATC TCGGCGCTGT CGAAGGGCGA GCGACCGGGG
CCGGAGAACT CGATTGGCAA GCTGGTGGCC GGTGTCATGC TGCAGGATAT CGCGACCTAT
GCCATGGATC TCGAGGGCGC CGCAGGCGTG CTCACGGGCG CAGACGAACA GGTCACGCAG
GGACAGTTTC AACAGATGCT GCTGACCTCG CCCTCGATGC GCATCGCTGG CGGCACCGAC
GAGATCCTGC GCAACATCAT CGCCGAGCGC GTGCTCGGTC TGCCCGGTGA CATCCGTGTC
GACAAGGATG TGCCGTTCAA CAAGGTGCCA ACCAGGGGAC GGAGCTAG
 
Protein sequence
MNFDDTPQEA AFRETARAWV AANAPKDLEA ELASSSLGRI RLKHADIVEV GKAWQKKKAE 
GGWACLHWPR EYGGRGATPI ERVIWQQEEG VYGKLTQPFQ IGEGMCGPTV MAYGSEAHKR
RYLPKLASGE EIWCQLFSEP AGGSDVAGLR TRAEQRGDDW IINGQKIWTS GAHYSDYGLL
ITRTDPNVPK HKGLTMFFLD MKSPGVEVRP IKQANGMQEF NEVYFTDVVI PDSQRLGAVG
DGWNVSLTTL MNERMSIGAR LATGFPEIFE FCTNLMTDNG LAIDDRATRS KLASWAVKAS
GLKYTSYRAI SALSKGERPG PENSIGKLVA GVMLQDIATY AMDLEGAAGV LTGADEQVTQ
GQFQQMLLTS PSMRIAGGTD EILRNIIAER VLGLPGDIRV DKDVPFNKVP TRGRS