More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5144 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5144  putative acyl-CoA dehydrogenase  100 
 
 
385 aa  783    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.16071 
 
 
-
 
NC_007952  Bxe_B2737  putative acyl-CoA dehydrogenase  76.36 
 
 
385 aa  595  1e-169  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3557  Acyl-CoA dehydrogenase, central region  74.94 
 
 
386 aa  586  1e-166  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7127  Acyl-CoA dehydrogenase  75.58 
 
 
385 aa  585  1e-166  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4074  acyl-CoA dehydrogenase-like protein  72.8 
 
 
386 aa  562  1.0000000000000001e-159  Cupriavidus metallidurans CH34  Bacteria  normal  0.0382192  normal 
 
 
-
 
NC_010002  Daci_0088  acyl-CoA dehydrogenase domain-containing protein  64.49 
 
 
385 aa  502  1e-141  Delftia acidovorans SPH-1  Bacteria  normal  0.745656  normal 
 
 
-
 
NC_008782  Ajs_0061  acyl-CoA dehydrogenase domain-containing protein  64.23 
 
 
385 aa  501  1e-141  Acidovorax sp. JS42  Bacteria  normal  0.957206  normal 
 
 
-
 
NC_007953  Bxe_C0207  putative acyl-CoA dehydrogenase  62.27 
 
 
387 aa  489  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  0.698342  normal  0.648676 
 
 
-
 
NC_009511  Swit_3274  acyl-CoA dehydrogenase domain-containing protein  65.54 
 
 
399 aa  490  1e-137  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.220833 
 
 
-
 
NC_009427  Saro_3624  acyl-CoA dehydrogenase domain-containing protein  63.35 
 
 
381 aa  487  1e-136  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4040  acyl-CoA dehydrogenase domain-containing protein  63.28 
 
 
410 aa  479  1e-134  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.572322  normal 
 
 
-
 
NC_007348  Reut_B4563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  57.62 
 
 
387 aa  453  1.0000000000000001e-126  Ralstonia eutropha JMP134  Bacteria  normal  0.131003  n/a   
 
 
-
 
NC_007953  Bxe_C0605  putative acyl-CoA dehydrogenase  59.1 
 
 
382 aa  447  1.0000000000000001e-124  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00592793  normal  0.0752366 
 
 
-
 
NC_010338  Caul_1895  acyl-CoA dehydrogenase domain-containing protein  55.73 
 
 
383 aa  409  1e-113  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0924  acyl-CoA dehydrogenase domain-containing protein  50.92 
 
 
383 aa  404  1e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5357  putative acyl-CoA dehydrogenase  51.91 
 
 
383 aa  377  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  0.0369214  normal 
 
 
-
 
NC_008048  Sala_1240  acyl-CoA dehydrogenase-like protein  51.74 
 
 
640 aa  357  1.9999999999999998e-97  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.485103  normal 
 
 
-
 
NC_013757  Gobs_3810  acyl-CoA dehydrogenase domain protein  50.91 
 
 
386 aa  350  3e-95  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.492901  n/a   
 
 
-
 
NC_010505  Mrad2831_3260  acyl-CoA dehydrogenase domain-containing protein  49.6 
 
 
383 aa  348  9e-95  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6298  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.61 
 
 
379 aa  344  1e-93  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_0907  acyl-CoA dehydrogenase domain protein  48.92 
 
 
374 aa  340  2.9999999999999998e-92  Gordonia bronchialis DSM 43247  Bacteria  normal  0.731697  n/a   
 
 
-
 
NC_011992  Dtpsy_0079  acyl-CoA dehydrogenase domain protein  48.27 
 
 
380 aa  335  5.999999999999999e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3917  acyl-CoA dehydrogenase domain-containing protein  50.81 
 
 
381 aa  329  4e-89  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0198331  normal 
 
 
-
 
NC_009338  Mflv_5166  Fis family transcriptional regulator  48.15 
 
 
382 aa  324  2e-87  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.170532 
 
 
-
 
NC_008254  Meso_3278  acyl-CoA dehydrogenase-like  42.49 
 
 
383 aa  323  4e-87  Chelativorans sp. BNC1  Bacteria  normal  0.827107  n/a   
 
 
-
 
NC_013757  Gobs_3772  acyl-CoA dehydrogenase domain protein  46.81 
 
 
378 aa  317  2e-85  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.717662  n/a   
 
 
-
 
NC_008726  Mvan_2876  acyl-CoA dehydrogenase domain-containing protein  48.64 
 
 
383 aa  316  4e-85  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0157602  normal 
 
 
-
 
NC_007958  RPD_0271  acyl-CoA dehydrogenase-like  42.75 
 
 
386 aa  310  2.9999999999999997e-83  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.360882 
 
 
-
 
NC_009485  BBta_7535  putative acyl-CoA dehydrogenase  43.26 
 
 
385 aa  309  5e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0482  acyl-CoA dehydrogenase domain protein  42.75 
 
 
386 aa  307  2.0000000000000002e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708423  n/a   
 
 
-
 
NC_007778  RPB_0558  Acyl-CoA dehydrogenase-like  42.49 
 
 
386 aa  304  2.0000000000000002e-81  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.58726  normal  0.0406105 
 
 
-
 
NC_013510  Tcur_2499  acyl-CoA dehydrogenase domain protein  43.09 
 
 
371 aa  288  1e-76  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000304997  n/a   
 
 
-
 
NC_008146  Mmcs_0213  acyl-CoA dehydrogenase-like protein  42.97 
 
 
385 aa  285  5.999999999999999e-76  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0223  acyl-CoA dehydrogenase domain-containing protein  42.97 
 
 
408 aa  285  8e-76  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0203  acyl-CoA dehydrogenase domain-containing protein  42.7 
 
 
385 aa  283  5.000000000000001e-75  Mycobacterium sp. JLS  Bacteria  normal  normal  0.672211 
 
 
-
 
NC_009077  Mjls_4154  acyl-CoA dehydrogenase domain-containing protein  42.52 
 
 
384 aa  270  2e-71  Mycobacterium sp. JLS  Bacteria  normal  0.041099  normal  0.843392 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  36.36 
 
 
398 aa  197  3e-49  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  36.62 
 
 
398 aa  196  4.0000000000000005e-49  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  36.36 
 
 
398 aa  196  6e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  36.36 
 
 
398 aa  196  6e-49  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
398 aa  196  6e-49  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  36.36 
 
 
398 aa  196  6e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  36.36 
 
 
398 aa  196  6e-49  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  36 
 
 
398 aa  193  5e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  34.31 
 
 
402 aa  192  1e-47  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  35.44 
 
 
398 aa  191  2e-47  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  32.16 
 
 
396 aa  190  4e-47  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  35.44 
 
 
398 aa  189  5e-47  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  36 
 
 
398 aa  189  7e-47  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  35.73 
 
 
386 aa  189  7e-47  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.35 
 
 
398 aa  188  1e-46  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  35.35 
 
 
398 aa  189  1e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  32.41 
 
 
396 aa  187  2e-46  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  32.67 
 
 
396 aa  187  2e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  35.1 
 
 
398 aa  187  2e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  35.1 
 
 
398 aa  187  2e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  35.93 
 
 
398 aa  186  5e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  32.92 
 
 
396 aa  186  8e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  35.34 
 
 
363 aa  185  9e-46  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  32.18 
 
 
396 aa  185  9e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  34.67 
 
 
393 aa  185  1.0000000000000001e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  35.18 
 
 
398 aa  184  2.0000000000000003e-45  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  35.71 
 
 
404 aa  182  8.000000000000001e-45  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  33.42 
 
 
398 aa  182  9.000000000000001e-45  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  33 
 
 
398 aa  182  1e-44  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  33.59 
 
 
398 aa  181  2e-44  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  32.66 
 
 
393 aa  181  2e-44  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.66 
 
 
400 aa  180  2.9999999999999997e-44  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  31.84 
 
 
403 aa  180  4e-44  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  31.83 
 
 
398 aa  180  4e-44  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  32.35 
 
 
402 aa  179  4.999999999999999e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  33.58 
 
 
402 aa  179  4.999999999999999e-44  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
374 aa  180  4.999999999999999e-44  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  32.08 
 
 
398 aa  179  4.999999999999999e-44  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  33.58 
 
 
402 aa  179  4.999999999999999e-44  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007950  Bpro_5277  acyl-CoA dehydrogenase-like  42.8 
 
 
389 aa  179  5.999999999999999e-44  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  32.66 
 
 
393 aa  179  5.999999999999999e-44  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  31.42 
 
 
400 aa  179  7e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  31.42 
 
 
398 aa  179  7e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  32.35 
 
 
402 aa  179  8e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  31.84 
 
 
403 aa  179  9e-44  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  33.17 
 
 
396 aa  179  9e-44  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  31.37 
 
 
400 aa  178  1e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  33.76 
 
 
395 aa  179  1e-43  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  33.33 
 
 
402 aa  178  1e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  32.07 
 
 
385 aa  178  1e-43  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  32.14 
 
 
452 aa  178  2e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  33.85 
 
 
398 aa  177  3e-43  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  33.17 
 
 
402 aa  177  3e-43  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  30.98 
 
 
403 aa  177  3e-43  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_009511  Swit_0376  acyl-CoA dehydrogenase domain-containing protein  32.82 
 
 
399 aa  177  4e-43  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.337989 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  32.11 
 
 
383 aa  176  5e-43  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3727  putative acyl-CoA dehydrogenase  33.25 
 
 
399 aa  176  6e-43  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  32.34 
 
 
416 aa  176  7e-43  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  32.59 
 
 
401 aa  176  7e-43  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  31.65 
 
 
402 aa  176  8e-43  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  32.07 
 
 
393 aa  176  9e-43  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  32.14 
 
 
393 aa  176  9e-43  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  31.39 
 
 
390 aa  176  9e-43  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  33.68 
 
 
386 aa  175  9.999999999999999e-43  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
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