Gene Aave_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4313 
Symbol 
ID4665636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4789932 
End bp4791140 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID639825499 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_972627 
Protein GI120612949 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.168466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.322728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC AATTCACCCC CCAGGAGGAA GCCTTCCGCG ACGAAGTGCA GGCCTTCCTG 
AAAGAGCACC TGCCCGCCGA GCTGTCGCAC AAGGTGCGCG CCGGCCTGCG CCTGGACAAG
GCCGACATGG AACGCTGGCA CGCCATCCTG AACGCGCGCG GCTGGCTCGC GAACCACTGG
CCCGAGCAGT ACGGCGGGCC GGGGTGGAAC GCCGTGCAGA AGTTCATCTT CGAGAACGAA
TGCGCGCTGG CCGGCGCGCC GCGCATCGTG CCCTTCGGCG TGAACATGCT GGGCCCCGTG
CTGATCAAGT ACGGCAACGA AGCGCAGAAG CAATACTGGC TGCCGCGCAT CCTGAACGGC
GAGGACTGGT GGTGCCAGGG CTATTCGGAG CCCGGCGCGG GCTCGGACCT GGCCTCGGTC
AAGACCACGG CGGTGCTGAA GCGGGATGCC AGTGGCGACC ACTACGTCGT CAACGGCCAG
AAGACCTGGA CCACGCTGGG CCAGCACGCC AACATGATCT TCTGCCTGGT GCGCACCGAC
CGCGAAGCCA AGGCGCAGTC GGGCATCAGC TTCCTGCTGG TGGACATGCG CTCGCCCGGC
GTCGAGGTGC GCCCGATCAT CACGCTGGAC GGCGAGCACG AAGTGAACGA GGTGTTCTTC
ACCGACGTGA AGGTACCGGC CGAGAACCTG GTGGGCGAGG AGAACAAGGG CTGGACCTAT
GCCAAGTACC TGCTGACCTA CGAGCGCACC AACATCGCGG GCGTGGGCTT CTCGGTGGCC
GCGCTGGAAA AGCTCAAGCG CGTGGCCGCC ACCGTGCAGT GCAACGGGCG CCCGCTCGCG
CAGGACCCGC TCTTCGCGGC GCGCCTCGCC CGCGTGGAGA TCGACCTGGA GAACATGAAG
ACCACCAATC TGCGCGTGAT CGCCGCGGTG GCCGGCGGCG GCGTGCCGGG CGCGGAAAGC
TCTATGCTGA AGATCCGCGG CACCGAGATC CGCCAGGAGA TCCTCTCGCT CACGCGGCGC
GCCATGGGAC CGTATGCACT GCCTTTCGAG GAAGAGGCGC TGCATGCAGG CCACGAAGAC
CTGGCCGTGG GGCCGGAGGG CGCTGCCGCA GCCGCGGCCA ACTACTTCAA CTACCGCAAG
CTGTCGATCT TCGGCGGCTC CAACGAGATC CAGAAAAACA TCATCTCCAA GATGATCCTG
GGGTTGTGA
 
Protein sequence
MDLQFTPQEE AFRDEVQAFL KEHLPAELSH KVRAGLRLDK ADMERWHAIL NARGWLANHW 
PEQYGGPGWN AVQKFIFENE CALAGAPRIV PFGVNMLGPV LIKYGNEAQK QYWLPRILNG
EDWWCQGYSE PGAGSDLASV KTTAVLKRDA SGDHYVVNGQ KTWTTLGQHA NMIFCLVRTD
REAKAQSGIS FLLVDMRSPG VEVRPIITLD GEHEVNEVFF TDVKVPAENL VGEENKGWTY
AKYLLTYERT NIAGVGFSVA ALEKLKRVAA TVQCNGRPLA QDPLFAARLA RVEIDLENMK
TTNLRVIAAV AGGGVPGAES SMLKIRGTEI RQEILSLTRR AMGPYALPFE EEALHAGHED
LAVGPEGAAA AAANYFNYRK LSIFGGSNEI QKNIISKMIL GL