| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2045 |
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| Symbol | |
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| ID | 1220885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2218315 |
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| End bp | 2219511 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637238439 |
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| Product | putative acyl-CoA dehydrogenase oxidoreductase protein |
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| Protein accession | NP_520166 |
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| Protein GI | 17546764 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.257916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.141872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA ACTACTCGGC GGCCGACGAT GCGTTCCGTC AGGAAGTCCG CGGCTGGCTG
GAAGCCGAAC TGCCCAAGGA CATCCAGGAC AAGGTGCTGA ACCACCGCCG CCTGAACCGC
GACGATTTCG TCCGCTGGCA CAAGGCGTTG GCGGCCAAGG GCTGGTCGGT GCCGCACTGG
CCGGTCGAGT GGGGCGGCAC CGGCTGGAGC CCGATCCAGA AGCACATCTG GGACGAGGAA
TGCGCACGCA TCGGCGCGCC GGGCGTGCTG CCGTTCGGCG TCAGCATGGT GGCGCCCGTC
ATCATGAAGT ACGGCAACGA GGCACAGAAG CGCTATTACC TGCCGCGCAT CCTCGACTGC
ACCGACTGGT GGTGCCAGGG CTACTCCGAG CCCGGCTCCG GCTCCGATCT CGCTTCGCTC
AAGACCCGCG CCGTGCGCGA GGGCGACCAC TACATCGTCA ACGGCCAGAA GACCTGGACC
ACGCTCGGCC AGCACGCCGA CATGATCTTC TGCCTTGTGC GCACCGATCC GCAGGCCAAG
ATGCAGGAGG GCATCTCGTT CCTGCTGATC GACATGAAGA CGCCGGGCAT CACCGTTCGG
CCGATCATCA TGCTGGACGA AGAGCACGAA GTGAACGAGG TGTTCTTCGA CAACGTGCGC
GTGCCGGCCG AGAACCTGAT CGGCGAAGAG AACCGTGGCT GGACGTACGC CAAATACCTG
CTGGGCCACG AGCGGACCGG CATCGCGCGC GTGGGGCATT CGAAGCGCGA GCTGGCGTTC
CTCAAGCGCG TCGCCCTGCA GCACCAGAAG AACGGCAGGC CGCTGCTGGA AGACCCGGTG
TTCGCGGCCA AGGTGGCATC GCTGGAGATC GAGCTGATGG CGCTGGAGAT CACTGTGCTG
CGTGTGGTGT CGAGCGAGGG CGTGGGCCGG GGGCCGGGCC CCGAGGCGTC GCTGCTCAAG
ATCAAGGGCA CGCAGATCCA GCAGATGCTG ACCGAGCTGA TGGTCGAGGC GGTGGGCCCG
TATGCGCAGC CGTTCGACCC GGACTACCTG GAAGGCGAGA CGCCGCGCGC CGTCACCGGC
GACAACGATG CCGCGCCGCT GGCGCCGTAC TACTTCAACT ATCGCAAGAC CTCGATCTAC
GGCGGGTCGA ACGAGATCCA GCGCAACATC ATCAGCCAGA TGATCCTCGG CGTCTGA
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| Protein sequence | MDLNYSAADD AFRQEVRGWL EAELPKDIQD KVLNHRRLNR DDFVRWHKAL AAKGWSVPHW
PVEWGGTGWS PIQKHIWDEE CARIGAPGVL PFGVSMVAPV IMKYGNEAQK RYYLPRILDC
TDWWCQGYSE PGSGSDLASL KTRAVREGDH YIVNGQKTWT TLGQHADMIF CLVRTDPQAK
MQEGISFLLI DMKTPGITVR PIIMLDEEHE VNEVFFDNVR VPAENLIGEE NRGWTYAKYL
LGHERTGIAR VGHSKRELAF LKRVALQHQK NGRPLLEDPV FAAKVASLEI ELMALEITVL
RVVSSEGVGR GPGPEASLLK IKGTQIQQML TELMVEAVGP YAQPFDPDYL EGETPRAVTG
DNDAAPLAPY YFNYRKTSIY GGSNEIQRNI ISQMILGV
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