| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_3550 |
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| Symbol | |
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| ID | 4024064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3946263 |
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| End bp | 3947453 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637963754 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_570674 |
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| Protein GI | 91978015 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03204] pimeloyl-CoA dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA ACTTCAGCAA GGAAGAAATC GCGTTTCGCG ACGAGGTGCG GGCGTTCTTC
AAGGAGAACG TGCCGGCGAA GACGCGGCAG AAGCTGGTCG AGGGCCGGCA CCCCAGCAAG
GACGAGATGG TGGAGTGGTA TCGCATCCTC CACAAGAAGG GCTGGGGCGT CACCCATTGG
CCGAAGGAAT TCGGCGGCAC CGGCTGGAGC TCGGTGCAGC ACTACATCTT CAACGAGGAA
CTGCAGGCCG CGCCGGCGCC GCAGCCGCTC GCCTTCGGCG TGTCGATGGT CGGCCCGGTG
ATCTACACCT TCGGCAACGA CGCGCAGAAG CAGCACTTCC TGCCGCGCAT CGCCAATGTC
GAAGATTGGT GGTGCCAGGG CTTCTCGGAG CCGGGCTCGG GCTCCGATCT CGCCTCGCTC
AAGACCAAGG CCGAGAAGAA GGGCGACAAA TACATCATCA ACGGCCAGAA AACCTGGACC
ACGCTGGCGC AATACGCCGA CTGGATCTTC TGCCTGTGCC GCACCGATCC CACGGCGAAG
AAGCAGTCGG GCATTTCCTT CATTCTGGTC GACATGAAGT CGAAGGGCAT CACCGTCCGC
CCGATCCAGA CCATCGACGG CGGCTTCGAG GTCAACGAAG TGTTCTTCGA CGACGTCGAA
GTGCCGGTCG AGAATCTGGT CGGTGAGGAG AACAAGGGCT GGGACTACGC CAAGTTCCTG
CTCGGCAACG AGCGCACCGG CATCGCCCGC GTCGGCATGT CGAAGGAGCG CATCCGCCGC
ATCAAGGAGC TCGCGGCGCA GGTCGAGTCC GGCGGTAAGC CAGTGATCGA GGACGTCAAG
TTCCGCGAGA AGCTGGCTGC GGTCGAGATC GAGCTGAAGG CGCTCGAGCT GACCCAGCTG
CGCGTCGTCG CCGATGAAGG CAAGCACGGC AAGGGCAAGC CGAATCCGGC GTCGTCGGTG
CTGAAGATCA AGGGCTCCGA GATCCAGCAG GCGACCACCG AGCTGCTGAT GGAAGTGATC
GGCCCGTTCG CCGCGCCCTA CGACGCGCAT GGCGACGACG ATTCCAACGA GACGATGGAC
TGGACCGCGC AGATCGCGCC GAGCTACTTC AACAACCGCA AGGTGTCGAT CTACGGCGGC
TCGAACGAGA TCCAGCGCAA TATCATCACC AAGGCGGTGC TCGGGCTGTA A
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| Protein sequence | MDLNFSKEEI AFRDEVRAFF KENVPAKTRQ KLVEGRHPSK DEMVEWYRIL HKKGWGVTHW
PKEFGGTGWS SVQHYIFNEE LQAAPAPQPL AFGVSMVGPV IYTFGNDAQK QHFLPRIANV
EDWWCQGFSE PGSGSDLASL KTKAEKKGDK YIINGQKTWT TLAQYADWIF CLCRTDPTAK
KQSGISFILV DMKSKGITVR PIQTIDGGFE VNEVFFDDVE VPVENLVGEE NKGWDYAKFL
LGNERTGIAR VGMSKERIRR IKELAAQVES GGKPVIEDVK FREKLAAVEI ELKALELTQL
RVVADEGKHG KGKPNPASSV LKIKGSEIQQ ATTELLMEVI GPFAAPYDAH GDDDSNETMD
WTAQIAPSYF NNRKVSIYGG SNEIQRNIIT KAVLGL
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