Gene Saro_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3557 
Symbol 
ID5077706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp173690 
End bp174904 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID640481281 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001165943 
Protein GI146275783 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.255939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCG AACTTTCCCC CGAAGACCAG GCCTTCCGCG ACGAGGTTCG CGCGTTCCTG 
GCCGCGAACC TCCCCCGCGA GGTGATCGAC GGCGCGGCCT CGTCGCCGAC GGTCTTCGTC
GAGCCGGACA TCGGCCAGCG CTGGAACGCG ATCCTCGCGG CCAAAGGCTG GCTGGCCTAC
CAGTGGCCGA AGGAAGCGGG CGGCACGGGC TGGAGCCCGG TGCAGCGCTA CATCTTCGAG
AAGGAATGCG CGCTGGCCGG CGCGCCCAAC CTGACGGTGC TCGGGCTCAA GCTGGTGGCG
CCGGTGATCT ACACCTTCGG CACGCCGGAG CAGAAGGCCA AGTACCTGCC GCGCATCCTT
TCGGGCGAGG ACTACTGGTG CCAGGGCTTT TCCGAGCCGG GCAGCGGATC TGACCTTGCC
AGCCTGCAGT GCCGCGCCAC GCTGTCCGAG GACGGCACGC ACTACAAGCT CAACGGATCG
AAGATCTGGA CAACCCATGC GCACTGGGCG AACCGCATGT TCGCACTGGT CCGCACCGAC
GCGACGGTCA AGAAGCAGGC GGGCATCTCG TTCGTGCTGG TCGACATGAA CCAGCCGGGC
GTCTCGGTGC GACCATTGCT GACGCTGGCG GGCGACCATG AGGTGAACCA GGTCTTCCTC
GAGGACGCCA TCGTTCCGGT CGAGGACCGC ATCGGCGAGG AAGGCGACGG GTGGAAGCTC
GCCAAGTTCC TGCTCGAGAA CGAGCGCGGC GGCTCCTGCC ATTCGCCCAA GCTGGAATAC
GACCTGGGCC AGATCGAGAA GGACGCCGCC GCCGAGCCAG ACGGGCGCGG CGGACGCCTG
GCCGACGATG CCGACTGGAA GCGCCGTGTG GCCAAGGTGC GCCTCGGCAT CCAGAGCCTC
GAGATGATCG AGCTGAAGAT CCTGTCGGAA GTGGCCAAGG GCCGTCCGCC GGGGCCGCAG
ACCTCGCTGT GCAAGCTGCT GGCATCGAAC CTGCGCCAGG ACGTCGACCT GCTGGCGGTG
GATCTCTATG GCACGGCGGG CCTCCAGCTC GACTTCGCGC GGCCGTTCTA TGGCGACAAC
GCCCCGGCCG CGATCCATTC CAGGGGTGCG CAAGTCGCAT CGGCACGGTA CCTCAACAGC
CGTGCGTGGA CCATTTTCGG CGGAACCAAC GAAGTGCAGG CGGGCATCAT CGCGCGCACT
GTGCTGGGAC TATAA
 
Protein sequence
MDIELSPEDQ AFRDEVRAFL AANLPREVID GAASSPTVFV EPDIGQRWNA ILAAKGWLAY 
QWPKEAGGTG WSPVQRYIFE KECALAGAPN LTVLGLKLVA PVIYTFGTPE QKAKYLPRIL
SGEDYWCQGF SEPGSGSDLA SLQCRATLSE DGTHYKLNGS KIWTTHAHWA NRMFALVRTD
ATVKKQAGIS FVLVDMNQPG VSVRPLLTLA GDHEVNQVFL EDAIVPVEDR IGEEGDGWKL
AKFLLENERG GSCHSPKLEY DLGQIEKDAA AEPDGRGGRL ADDADWKRRV AKVRLGIQSL
EMIELKILSE VAKGRPPGPQ TSLCKLLASN LRQDVDLLAV DLYGTAGLQL DFARPFYGDN
APAAIHSRGA QVASARYLNS RAWTIFGGTN EVQAGIIART VLGL