More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5530 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  100 
 
 
386 aa  789    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  53.63 
 
 
400 aa  424  1e-117  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  52.99 
 
 
403 aa  423  1e-117  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  52.37 
 
 
402 aa  420  1e-116  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  51.76 
 
 
399 aa  411  1e-114  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  52.01 
 
 
398 aa  407  1.0000000000000001e-112  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  49.49 
 
 
396 aa  405  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  49.49 
 
 
396 aa  404  1e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4559  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  55.56 
 
 
382 aa  398  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.308203  n/a   
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  49.24 
 
 
396 aa  400  9.999999999999999e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  48.23 
 
 
396 aa  396  1e-109  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  51.8 
 
 
386 aa  393  1e-108  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  50.13 
 
 
397 aa  391  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  46.97 
 
 
396 aa  385  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.49 
 
 
397 aa  383  1e-105  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
398 aa  380  1e-104  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  49.12 
 
 
398 aa  378  1e-104  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  49.12 
 
 
398 aa  379  1e-104  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  49.12 
 
 
398 aa  379  1e-104  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  48.99 
 
 
398 aa  375  1e-103  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  49.12 
 
 
398 aa  377  1e-103  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  48.87 
 
 
398 aa  375  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  49.37 
 
 
398 aa  377  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  375  1e-103  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  49.5 
 
 
398 aa  374  1e-102  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  374  1e-102  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
398 aa  374  1e-102  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  374  1e-102  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  374  1e-102  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  46.1 
 
 
398 aa  369  1e-101  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.62 
 
 
400 aa  365  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  48.88 
 
 
398 aa  367  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  48.87 
 
 
398 aa  366  1e-100  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  45.84 
 
 
398 aa  364  1e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
385 aa  365  1e-99  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  49.62 
 
 
385 aa  364  1e-99  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  45.34 
 
 
398 aa  364  2e-99  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  46.87 
 
 
400 aa  362  5.0000000000000005e-99  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_013441  Gbro_0690  acyl-CoA dehydrogenase domain protein  50.12 
 
 
398 aa  362  7.0000000000000005e-99  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.37 
 
 
395 aa  361  1e-98  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  46.46 
 
 
397 aa  361  1e-98  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  46.87 
 
 
398 aa  359  4e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  46.46 
 
 
397 aa  359  4e-98  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  47.37 
 
 
398 aa  359  4e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  45.52 
 
 
403 aa  358  7e-98  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3726  acyl-CoA dehydrogenase domain-containing protein  51.79 
 
 
383 aa  358  9.999999999999999e-98  Nocardioides sp. JS614  Bacteria  normal  0.018504  n/a   
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  46.88 
 
 
402 aa  357  1.9999999999999998e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  44.58 
 
 
398 aa  356  2.9999999999999997e-97  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_008705  Mkms_5207  acyl-CoA dehydrogenase domain-containing protein  49.62 
 
 
399 aa  356  3.9999999999999996e-97  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5498  acyl-CoA dehydrogenase domain-containing protein  49.62 
 
 
399 aa  356  3.9999999999999996e-97  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5118  acyl-CoA dehydrogenase-like protein  49.62 
 
 
399 aa  356  3.9999999999999996e-97  Mycobacterium sp. MCS  Bacteria  normal  0.840312  n/a   
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  45.27 
 
 
403 aa  356  3.9999999999999996e-97  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  44.84 
 
 
398 aa  354  1e-96  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  44.61 
 
 
400 aa  354  1e-96  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  44.84 
 
 
398 aa  353  2.9999999999999997e-96  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2179  acyl-CoA dehydrogenase domain protein  50.13 
 
 
391 aa  350  3e-95  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  45.14 
 
 
402 aa  349  5e-95  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  46.02 
 
 
402 aa  347  2e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  43.58 
 
 
397 aa  347  3e-94  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  44.5 
 
 
402 aa  346  4e-94  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  46.63 
 
 
393 aa  345  7e-94  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  45 
 
 
399 aa  345  1e-93  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  46.56 
 
 
393 aa  344  1e-93  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  46.29 
 
 
404 aa  344  2e-93  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  46.94 
 
 
379 aa  342  5e-93  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  45.27 
 
 
402 aa  342  5e-93  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3835  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.13 
 
 
401 aa  342  7e-93  Ralstonia eutropha JMP134  Bacteria  normal  0.520292  n/a   
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  42.89 
 
 
402 aa  342  7e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  48.25 
 
 
399 aa  342  8e-93  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  43.14 
 
 
402 aa  342  9e-93  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  43.39 
 
 
402 aa  342  9e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  43.14 
 
 
402 aa  341  1e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  43.14 
 
 
402 aa  341  1e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  42.89 
 
 
416 aa  339  4e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_010512  Bcenmc03_6832  acyl-CoA dehydrogenase domain-containing protein  46 
 
 
403 aa  336  3.9999999999999995e-91  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.111303  normal 
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  42.54 
 
 
403 aa  335  7e-91  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  42.64 
 
 
402 aa  335  9e-91  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  42.71 
 
 
393 aa  334  1e-90  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
402 aa  332  7.000000000000001e-90  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
402 aa  332  7.000000000000001e-90  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
402 aa  332  7.000000000000001e-90  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
402 aa  332  7.000000000000001e-90  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  42.39 
 
 
402 aa  332  8e-90  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  42.89 
 
 
402 aa  330  2e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  44.05 
 
 
393 aa  330  2e-89  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  41.87 
 
 
401 aa  328  1.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  44.75 
 
 
398 aa  328  1.0000000000000001e-88  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  44.25 
 
 
398 aa  326  4.0000000000000003e-88  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  42 
 
 
393 aa  326  6e-88  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  44.75 
 
 
398 aa  325  8.000000000000001e-88  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3727  putative acyl-CoA dehydrogenase  45.73 
 
 
399 aa  325  1e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  41.96 
 
 
393 aa  323  2e-87  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  42.21 
 
 
393 aa  324  2e-87  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  42.21 
 
 
393 aa  322  7e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  44.28 
 
 
452 aa  322  7e-87  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  41.46 
 
 
393 aa  319  3.9999999999999996e-86  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  41.96 
 
 
393 aa  319  5e-86  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  43.62 
 
 
396 aa  316  4e-85  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  42.5 
 
 
400 aa  316  6e-85  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  40.7 
 
 
393 aa  314  1.9999999999999998e-84  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
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