More than 300 homologs were found in PanDaTox collection
for query gene Patl_0105 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  100 
 
 
396 aa  817    Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  53.62 
 
 
397 aa  434  1e-120  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  53.63 
 
 
397 aa  422  1e-117  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51 
 
 
400 aa  416  9.999999999999999e-116  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  51.25 
 
 
400 aa  416  9.999999999999999e-116  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
404 aa  414  1e-114  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  51.13 
 
 
396 aa  409  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  52.14 
 
 
396 aa  409  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  51.63 
 
 
399 aa  408  1.0000000000000001e-112  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  50.25 
 
 
398 aa  406  1.0000000000000001e-112  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  50.88 
 
 
396 aa  406  1.0000000000000001e-112  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  49.75 
 
 
398 aa  405  1.0000000000000001e-112  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  51.61 
 
 
402 aa  407  1.0000000000000001e-112  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  51.25 
 
 
400 aa  403  1e-111  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  50.88 
 
 
396 aa  403  1e-111  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  49.5 
 
 
398 aa  402  1e-111  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  50.25 
 
 
398 aa  400  9.999999999999999e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  51.26 
 
 
393 aa  400  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  49.5 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
398 aa  395  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  48.76 
 
 
398 aa  395  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  48.76 
 
 
398 aa  395  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
397 aa  396  1e-109  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  48.87 
 
 
398 aa  392  1e-108  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  48.76 
 
 
398 aa  394  1e-108  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  49 
 
 
402 aa  394  1e-108  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  47.99 
 
 
398 aa  392  1e-108  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  48.51 
 
 
398 aa  393  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
398 aa  391  1e-107  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  47.74 
 
 
398 aa  389  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  48.76 
 
 
402 aa  391  1e-107  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
398 aa  389  1e-107  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  47.76 
 
 
398 aa  389  1e-107  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  49.62 
 
 
396 aa  386  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
398 aa  387  1e-106  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  48.64 
 
 
402 aa  385  1e-106  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  48.51 
 
 
402 aa  387  1e-106  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  48.26 
 
 
402 aa  385  1e-106  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  48.26 
 
 
402 aa  385  1e-106  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.37 
 
 
397 aa  384  1e-105  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  48.02 
 
 
403 aa  383  1e-105  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  49.62 
 
 
393 aa  382  1e-105  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  47.76 
 
 
402 aa  382  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  50.37 
 
 
403 aa  383  1e-105  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  48.01 
 
 
402 aa  384  1e-105  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  48.76 
 
 
402 aa  384  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
398 aa  384  1e-105  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  47.51 
 
 
416 aa  376  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  47.77 
 
 
403 aa  375  1e-103  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  48.48 
 
 
393 aa  378  1e-103  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  47.26 
 
 
402 aa  378  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  48.01 
 
 
402 aa  372  1e-102  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  47.41 
 
 
399 aa  372  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  47.52 
 
 
403 aa  374  1e-102  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  46.88 
 
 
400 aa  370  1e-101  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
402 aa  368  1e-101  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
402 aa  369  1e-101  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
402 aa  368  1e-101  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
402 aa  368  1e-101  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
402 aa  368  1e-101  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  49.25 
 
 
393 aa  369  1e-101  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  48.01 
 
 
402 aa  368  1e-101  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  46.5 
 
 
398 aa  369  1e-101  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  47.74 
 
 
393 aa  366  1e-100  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  48.14 
 
 
403 aa  368  1e-100  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  46.5 
 
 
398 aa  368  1e-100  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  46.75 
 
 
398 aa  368  1e-100  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  47.62 
 
 
397 aa  367  1e-100  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  47.38 
 
 
393 aa  366  1e-100  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  47.88 
 
 
393 aa  363  4e-99  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  47.75 
 
 
400 aa  360  2e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  47.37 
 
 
393 aa  360  3e-98  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  47.38 
 
 
393 aa  360  3e-98  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  48.23 
 
 
386 aa  359  5e-98  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  45.61 
 
 
398 aa  358  9e-98  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  47.37 
 
 
393 aa  357  2.9999999999999997e-97  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  47.13 
 
 
393 aa  355  6.999999999999999e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  46.8 
 
 
401 aa  355  1e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  46.37 
 
 
398 aa  355  1e-96  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  47.12 
 
 
393 aa  354  2e-96  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  44.58 
 
 
452 aa  349  5e-95  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  43.55 
 
 
411 aa  348  1e-94  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  44.91 
 
 
400 aa  347  2e-94  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  44.47 
 
 
412 aa  342  9e-93  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  43.61 
 
 
395 aa  341  1e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  41.99 
 
 
411 aa  341  1e-92  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  46.6 
 
 
379 aa  340  2.9999999999999998e-92  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_013441  Gbro_0690  acyl-CoA dehydrogenase domain protein  45.75 
 
 
398 aa  338  9.999999999999999e-92  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4559  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.19 
 
 
382 aa  332  7.000000000000001e-90  Ralstonia eutropha JMP134  Bacteria  normal  0.308203  n/a   
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  45.9 
 
 
399 aa  332  9e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  44.44 
 
 
385 aa  331  2e-89  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_010512  Bcenmc03_6832  acyl-CoA dehydrogenase domain-containing protein  43.38 
 
 
403 aa  329  4e-89  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.111303  normal 
 
 
-
 
NC_009077  Mjls_1724  acyl-CoA dehydrogenase domain-containing protein  44.55 
 
 
410 aa  327  2.0000000000000001e-88  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  43.8 
 
 
410 aa  327  2.0000000000000001e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_008705  Mkms_1790  acyl-CoA dehydrogenase domain-containing protein  44.55 
 
 
410 aa  328  2.0000000000000001e-88  Mycobacterium sp. KMS  Bacteria  normal  0.340582  normal 
 
 
-
 
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