| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1274 |
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| Symbol | |
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| ID | 7973198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1389783 |
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| End bp | 1390964 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791871 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002943191 |
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| Protein GI | 239814281 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.409233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTGA GCTTCACGCC CGAAGAACAG CAGTTCCGCG AAGAAATTCG CGCCTGGGTC
AGAGAAAACC TTCCCCAAGA AATTTCGCAC AAGGTGCACA ACGCGCTCGA GCTGACGCGC
GACGATTTGC AGGGCTGGGC CAAGATTCTT GGCAAGAAGG GCTGGCTCGG CTACGGCTGG
CCGAAGGAAT TCGGCGGCCC CGGCTGGACC GCCATCCAGC GCCACCTGTT CGAGGAAGAA
ACCGCGCTGG CCGGCGCGCC GCGCATCATC CCGTTCGGCC CCGTGATGGT CGCCCCGGTG
ATCATGGCCT TCGGCAATGC CGAGCAGCAG AAGCGCTTCC TCCCCGGCAT CGCGAGCGGC
GAGGTCTGGT GGAGCCAGGG CTACAGCGAG CCCGGCTCGG GCTCCGACCT GGCCTCGGTC
AAGACCAAGG CAGAGCGCCA CGGCGACAAG TACATCGTCA ACGGCCAGAA GACCTGGACC
ACCCTCGGCC AGTATGGCGA CTGGATGTTC AACCTGGTGC GCACCAGCAA CGAGGGCAAG
CCCCAGACCG GCATCAGCTT TCTGCTGCTC GACATGAAGT CGCCCGGCGT CACGGTGCGG
CCGATCAAGC TGCTGGATGG CAGCCATGAA GTGAACGAGG TGTTCTTCGA CAACGTCGAG
GTGCCGGCCG AGAACCTGAT CGGCGAGGAG AACAAGGGCT GGACCTACGC CAAGCACCTG
CTCTCGCACG AGCGCACCAA CATCGCCGAC GTGAACCGCG CCAAGCGCGA GCTCGAGCGC
CTGAAGCGCA TCGCCAAGAG CGAAGGCGTC TACGACGACC AGCGCTTCCG CGACGAGATC
GCCAAGCTCG AGGTCGACAT CGTCGCGCTC GAGATGATGG TGCTGCGCGT GCTTTCGGCC
GCCACCTCGG GCAAGAATTC GCTCGATGTC GCGGGCCTGC TCAAGATCCG CGGCAGCGAG
ATCCAGCAGC GCTACAGCGA ACTGATGATG CTGGCCGGCG GCGCCTATTC GCTGCCGCTC
ATCCGCGAAG CGATGGAAGC CGGCTGGCAG GGCAACTTCC CGGGCGGCAA CCCGGCGCTC
GCGCCGCTTG CATCGACCTT CTTCAACATG CGCAAGACCA CCATCTACGG CGGCTCGAAC
GAAGTGCAAC GCAACATCGT CGCCCAGACG GTGCTGGGCT GA
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| Protein sequence | MDLSFTPEEQ QFREEIRAWV RENLPQEISH KVHNALELTR DDLQGWAKIL GKKGWLGYGW
PKEFGGPGWT AIQRHLFEEE TALAGAPRII PFGPVMVAPV IMAFGNAEQQ KRFLPGIASG
EVWWSQGYSE PGSGSDLASV KTKAERHGDK YIVNGQKTWT TLGQYGDWMF NLVRTSNEGK
PQTGISFLLL DMKSPGVTVR PIKLLDGSHE VNEVFFDNVE VPAENLIGEE NKGWTYAKHL
LSHERTNIAD VNRAKRELER LKRIAKSEGV YDDQRFRDEI AKLEVDIVAL EMMVLRVLSA
ATSGKNSLDV AGLLKIRGSE IQQRYSELMM LAGGAYSLPL IREAMEAGWQ GNFPGGNPAL
APLASTFFNM RKTTIYGGSN EVQRNIVAQT VLG
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