| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0451 |
|---|
| Symbol | |
|---|
| ID | 4883970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 421218 |
|---|
| End bp | 422426 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640126379 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001057504 |
|---|
| Protein GI | 126440533 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA ATTTCACCGC AGAAGAGGAA GCGTTCCGCG CGCAAGTGCA GCGCTTTCTC
GCCGACGAGC TGCCGCCGCG CATATCGCGC AAGGTGAAGG GCGGCTTGCG GCTCACGCGC
GACGACATGC GCGAATGGCA CGCCATCCTC AACGCGCGGG GCTGGCTCGC GAGCCACTGG
CCGCGCGAAT GGGGCGGCCC AGGCTGGAGC GTCGCGCAGA AGTTCCTGTT CGACAACGAA
TGCGCGATCG CGGGCGCGCC GCGCATCGTG CCGTTCGGCG TGAACATGCT CGGCCCCGTG
CTCATCAAGT ACGGCAGCGC AGCGCAGAAG CGCCACTGGC TGCCGCGCAT TCTCGACGGC
ACCGACTGGT GGTGCCAGGG CTATTCGGAG CCGGGCGCGG GCTCGGATCT CGCGGCGGTG
AGCACGAGCG CGGTGCGCGG CGTGGATGCG CGGGGCGATC ATTACATCGT CAACGGCCAG
AAGACTTGGA CGACGCTCGG CCATTACGCG AACATGATCT TCTGCCTCGT GCGCACCGCG
ACCGACGTGC GCAAGCAGGA AGGCATCAGC TTCCTGCTCG TCGACATGAA TTCGCCCGGC
GTGGAGGTGC GCCCGATCGT CACGCTCGAC GGCGAGCACG AAGTGAACGA AGTGTTCTTC
ACCGACGTGC GCGTGCCCGC CGAGAACCGG GTCGGCGAAG AGAACCAGGG CTGGACCTAC
GCGAAATACC TGCTCACGTA CGAGCGCACC AACATCGCGG GCGTGGGCTT CTCGGTCGCG
GCGCTGGACA AGTTGCGCGC GGTGGCGGCG AAAGTGACGA AGAACGGCCG CCCGCTCGCC
GACGATCCGC TCTTCGCCGC GCGGCTCGCG CGCGTCGCGA TCGAGCTCGA CAACATGAAG
ACGACGAACC TGCGCGTGCT CGCGGCCGTG GCGGGCGGTG GCGCGCCGGG CGCGGAAAGC
TCGATGCTGA AGATTCGCGG CACGCAGATC CGCCAGGAGA TCTCGTCGCT GATGCGGCGC
GCGATGGGGC CGTACGCGCA GCCGTTCGTC GACGCGGCGC TCGACGCCGA CGACGGCGAG
CCGCCGGGCG GCCTGCCCGA AGCGGCGAGC GCCGCGACGC AGTATTTCAA CAACCGCAAG
CTGTCGATCT TCGGCGGCTC GAACGAGATT CAAAAGAACA TCATCTCGAA GATGATGCTG
GGGTTGTAA
|
|---|
| Protein sequence | MDLNFTAEEE AFRAQVQRFL ADELPPRISR KVKGGLRLTR DDMREWHAIL NARGWLASHW
PREWGGPGWS VAQKFLFDNE CAIAGAPRIV PFGVNMLGPV LIKYGSAAQK RHWLPRILDG
TDWWCQGYSE PGAGSDLAAV STSAVRGVDA RGDHYIVNGQ KTWTTLGHYA NMIFCLVRTA
TDVRKQEGIS FLLVDMNSPG VEVRPIVTLD GEHEVNEVFF TDVRVPAENR VGEENQGWTY
AKYLLTYERT NIAGVGFSVA ALDKLRAVAA KVTKNGRPLA DDPLFAARLA RVAIELDNMK
TTNLRVLAAV AGGGAPGAES SMLKIRGTQI RQEISSLMRR AMGPYAQPFV DAALDADDGE
PPGGLPEAAS AATQYFNNRK LSIFGGSNEI QKNIISKMML GL
|
|---|
| |