More than 300 homologs were found in PanDaTox collection
for query gene Plav_1065 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
402 aa  836    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  58.81 
 
 
403 aa  494  1e-139  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.74 
 
 
411 aa  458  9.999999999999999e-129  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  54.61 
 
 
412 aa  459  9.999999999999999e-129  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  51.24 
 
 
400 aa  424  1e-117  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  53.81 
 
 
397 aa  422  1e-117  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  52.85 
 
 
397 aa  419  1e-116  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
400 aa  420  1e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  54.48 
 
 
404 aa  417  9.999999999999999e-116  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  52.94 
 
 
399 aa  417  9.999999999999999e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  50.74 
 
 
398 aa  411  1e-114  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  50.74 
 
 
398 aa  411  1e-114  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  50.74 
 
 
398 aa  411  1e-114  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  51.24 
 
 
398 aa  409  1e-113  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.99 
 
 
400 aa  409  1e-113  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  50.5 
 
 
398 aa  410  1e-113  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  51.48 
 
 
400 aa  409  1e-113  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  49.75 
 
 
398 aa  406  1.0000000000000001e-112  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  49.26 
 
 
398 aa  405  1.0000000000000001e-112  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  51.08 
 
 
411 aa  406  1.0000000000000001e-112  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  50.5 
 
 
398 aa  408  1.0000000000000001e-112  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  49.75 
 
 
398 aa  406  1.0000000000000001e-112  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  49.75 
 
 
398 aa  406  1.0000000000000001e-112  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  50.37 
 
 
398 aa  405  1.0000000000000001e-112  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  49.75 
 
 
398 aa  406  1.0000000000000001e-112  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
398 aa  406  1.0000000000000001e-112  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
398 aa  405  1e-111  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  49.5 
 
 
398 aa  404  1e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  49.63 
 
 
398 aa  404  1e-111  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  50.74 
 
 
400 aa  402  1e-111  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  49.39 
 
 
398 aa  401  9.999999999999999e-111  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  48.52 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  49.75 
 
 
402 aa  396  1e-109  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  48.77 
 
 
398 aa  396  1e-109  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  48.78 
 
 
416 aa  397  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  48.05 
 
 
402 aa  396  1e-109  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  48.05 
 
 
402 aa  396  1e-109  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  48.29 
 
 
402 aa  398  1e-109  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  48.29 
 
 
402 aa  394  1e-108  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  49.14 
 
 
398 aa  393  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  49.02 
 
 
402 aa  392  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
401 aa  392  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  48.4 
 
 
398 aa  389  1e-107  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  48.16 
 
 
398 aa  391  1e-107  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
393 aa  389  1e-107  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  49.88 
 
 
393 aa  390  1e-107  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  48.66 
 
 
403 aa  388  1e-107  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  50.12 
 
 
393 aa  390  1e-107  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  48.17 
 
 
402 aa  389  1e-107  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  48.76 
 
 
393 aa  386  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  48.28 
 
 
402 aa  386  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  48.4 
 
 
398 aa  386  1e-106  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  49.14 
 
 
393 aa  386  1e-106  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  48.66 
 
 
403 aa  388  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  49.64 
 
 
393 aa  387  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  49.26 
 
 
452 aa  383  1e-105  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  47.92 
 
 
402 aa  382  1e-105  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  48.17 
 
 
402 aa  385  1e-105  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  48.29 
 
 
402 aa  383  1e-105  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  47.92 
 
 
402 aa  382  1e-105  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  48.53 
 
 
402 aa  384  1e-105  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  47.9 
 
 
398 aa  382  1e-105  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  49.26 
 
 
400 aa  383  1e-105  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  48.4 
 
 
397 aa  382  1e-105  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  47.92 
 
 
402 aa  382  1e-105  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  47.92 
 
 
402 aa  382  1e-105  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  47.92 
 
 
402 aa  381  1e-105  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
393 aa  381  1e-104  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  47.56 
 
 
403 aa  379  1e-104  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  49.01 
 
 
397 aa  380  1e-104  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  48.15 
 
 
396 aa  380  1e-104  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  49.5 
 
 
393 aa  378  1e-104  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.3 
 
 
397 aa  377  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  47.65 
 
 
398 aa  377  1e-103  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  47.41 
 
 
396 aa  376  1e-103  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  49.26 
 
 
393 aa  375  1e-103  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  47.39 
 
 
396 aa  376  1e-103  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  47.65 
 
 
398 aa  378  1e-103  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  46.57 
 
 
402 aa  374  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  45.93 
 
 
398 aa  370  1e-101  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  46.67 
 
 
396 aa  366  1e-100  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  46.67 
 
 
396 aa  366  1e-100  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  46.67 
 
 
396 aa  365  1e-100  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  44.69 
 
 
399 aa  362  5.0000000000000005e-99  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  46.42 
 
 
398 aa  362  7.0000000000000005e-99  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  48.51 
 
 
393 aa  362  9e-99  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  45.72 
 
 
403 aa  360  2e-98  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  47.29 
 
 
379 aa  358  7e-98  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  46.77 
 
 
393 aa  355  6.999999999999999e-97  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1806  acyl-CoA dehydrogenase domain protein  47 
 
 
410 aa  353  2.9999999999999997e-96  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.445924  n/a   
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  45.14 
 
 
393 aa  349  4e-95  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.32 
 
 
395 aa  349  5e-95  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009077  Mjls_1724  acyl-CoA dehydrogenase domain-containing protein  47.03 
 
 
410 aa  349  6e-95  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0690  acyl-CoA dehydrogenase domain protein  45.7 
 
 
398 aa  348  8e-95  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1743  acyl-CoA dehydrogenase-like protein  46.79 
 
 
410 aa  347  2e-94  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1790  acyl-CoA dehydrogenase domain-containing protein  46.79 
 
 
410 aa  347  2e-94  Mycobacterium sp. KMS  Bacteria  normal  0.340582  normal 
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  45.84 
 
 
410 aa  344  1e-93  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_009338  Mflv_4379  acyl-CoA dehydrogenase domain-containing protein  47.38 
 
 
410 aa  343  2.9999999999999997e-93  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.770701  normal 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  45.27 
 
 
386 aa  342  5.999999999999999e-93  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3358  acyl-CoA dehydrogenase domain protein  45.91 
 
 
410 aa  340  2e-92  Gordonia bronchialis DSM 43247  Bacteria  normal  0.72222  n/a   
 
 
-
 
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