Gene Mkms_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1790 
Symbol 
ID4613898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1898270 
End bp1899502 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content67% 
IMG OID639791456 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_937781 
Protein GI119867829 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.340582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTGA CCTGGTCAGA TCGCGATCTG GCGTTTCGCG ACGAGGTGCG CGCGTTCCTC 
GCCGAGAAAC TGACCCCGGA AATCCAGCGG GCGGGGCGGC TGATGACCAG CGTCTACGCC
GACCACGACG CCAGCATGGC GTGGCAGAAG ATCCTGCATG AGCGGGGCTG GGCGGCACCG
GCATGGCCGG TCGAGTACGG CGGCTGCGAC TGGAGCCTCA CCCAGCACTA CATCTTCAGC
CGGGAGTCCA CACTGGCCGG GGCTCCGTCC CTGTCCCCCA TGGGGATCCG GATGGTCGCG
CACGCGATCA TCAAATTCGG CACCCCCGAG CAGAAGGACT ACTTCCTCCC CCGCATCCTC
ACCGGCGAGG TGTTCTTCTG CCAGGGCTAC TCCGAACCGG AGGCCGGCTC CGACCTCGCC
GCACTGACCA TGGCGGCCGT CGACGACGGC GACGACCTGG TGTGCACGGG CAGCAAGATC
TGGACGACCC ATGCCGCGGA GGCGAATTGG ATGTTCGCCC TGGTGCGGAC CACCCGCGCA
CCGAAGAAGC AGCAGGGCAT CACCTTCGTC CTGATCGACA TGACGACCCC CGGTATCGAG
ATCCGGCCGC TCGTGATGAC CTCTGGTGAG GAAGTCCAGA ACCAGGTCTT CTTCGACGAG
GTCCGCGTAC CCAAGAGCAA CGTCATCGGC GAGATCGACG ACGGTTGGAC CGTCGCCAAG
TACCTACTGG AATTCGAACG CGGCGGCGGG TCCTCCGCAC CCGCGCTGCA GGTGCTGGCC
GAGGAGATCG CCACCGTCGC AGCCGATCAG CCGGGGCCCG AAGGTGGCCG GCTCATCGAC
GACGCGAGGT TCGCCCAGCG ACTGGCCGAC GCGCGGATCC GCACCGACGT CCTCGAGATC
CTGGAGTACC GGGTGCTCGC CACGGTCGCG GCGGGCGGGA ACCCCGGGTC GGCGTCGTCG
ATGCTCAAGG TGCTCGGCAC CGAACTGAGC CAGGACCTGA CGGAGCTGGC GATGGCGGCC
GCCGGTCCAC GGTCGCGGGT GTATCAGCCG CATGCGACCT GTCCCGGCGG GCCGGTGGCC
GAGTACGAAC CGCCGGCCGA CGGTTACGTG AGCGGCGAAC CGTGGCAGGC GGTGGCGCCC
CTGCGCTACT TCAACGACCG CGCCGGCTCG ATCTACGCCG GCAGCAACGA AATTCAACGC
AACATCCTGG CTAAGGCAGC ATTGGGGCTC TGA
 
Protein sequence
MDLTWSDRDL AFRDEVRAFL AEKLTPEIQR AGRLMTSVYA DHDASMAWQK ILHERGWAAP 
AWPVEYGGCD WSLTQHYIFS RESTLAGAPS LSPMGIRMVA HAIIKFGTPE QKDYFLPRIL
TGEVFFCQGY SEPEAGSDLA ALTMAAVDDG DDLVCTGSKI WTTHAAEANW MFALVRTTRA
PKKQQGITFV LIDMTTPGIE IRPLVMTSGE EVQNQVFFDE VRVPKSNVIG EIDDGWTVAK
YLLEFERGGG SSAPALQVLA EEIATVAADQ PGPEGGRLID DARFAQRLAD ARIRTDVLEI
LEYRVLATVA AGGNPGSASS MLKVLGTELS QDLTELAMAA AGPRSRVYQP HATCPGGPVA
EYEPPADGYV SGEPWQAVAP LRYFNDRAGS IYAGSNEIQR NILAKAALGL