Gene Caul_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3392 
Symbol 
ID5900847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3663603 
End bp3664814 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID641563898 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001685017 
Protein GI167647354 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.160573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGG CGTTCTCCCC CGAGGACCTG GCCTTCCAGC AGGAGGTCCG CGACTGGATC 
GCGACGGCCT ATGACGACGA CCTGCGCCGC AAGGTGGCCC AGTCGAAGAA CGGCTATCTG
GACAAGGCCG GCCAGGTGAA GTGGCAGAAG AGGTTGTTCG AACGCGGCTG GGCCGCGCCC
GACTGGCCAG TCGAGCTGGG TGGGGCGGGC TTCACCCCGT CGCAGCGCTA CATCTTCAAC
ATGGAGCTGT CGCTGGCGGG TACGCCCAAC CCCTCGCCGA TGGGGCTGAA GATGTGCGCG
CCGGTGATCA TGGCGTTCGG CACGCCCGAG CAGAAGGCCC AGCACCTGCC GCCGATCCTG
TCGTCCGACA TCTGGTGGTG TCAGGGCTAC TCAGAGCCGG GCTCGGGCTC GGACCTGGCC
AGCCTGCAGA TGAAGGCGAA GCGGGACGGC GACGACTATG TGCTGAACGG CTCGAAGATC
TGGACCACCC ATGCCCAGTG GGCCGACTGG ATGTTCTGCC TGGTGCGCAC GTCGAGCGAG
GGCAAGCCGC AGGAGGGCAT CAGCTTCCTG CTGTTGCCGA TGACCCTGCC GGGCATCCAG
ATCAAACCGC TGCCGACGCT GGACGGTCCG GCCGAGGGCG AGCAGGAGAT CAACCAGGTC
TTCTTCGACA ATGTCCGCGT CCCGGTCGCC AACCGCATCG GCGAGGAGAA CAAGGGCTGG
ACCTACGCCA AGTACCTGCT GGAATTCGAA CGCGGCAACG CCTACGCGCC GGGCCTGATG
CACATGCTGC GCAAGGTCAA GAAGATCGCA GCCCTGGAAC GGGCCGACGA TGGCGGGGCG
CTGATCGAGG ATTTGGACTT CCGCACCAAG ATCGCCGAGC TGGAAATCGC CGTGGAGTCG
CTGAACGCCA CCGAGCTGCG GATCTTCTCC GGCCGAGGGG CGGGCAAGGC GGTGGGACCG
GCCTCGTCGA TGCTGAAGCT GGCGGGCTCG GAAACCCAGC AGGCGATCAC CGAACTGGCC
CTGGAGGCGG TGGGGAGCTA CGCCGCGCCG TTCGTGCGCG ACACCTGGGC GGCGAGCAAT
GACGGCCGGG CTGGACCGGA CTACGCCGGC CCGGCCGCCC CGGCCTATTT CAGCTATCGC
AAGACCACGA TCTATGCGGG CTCCAGCGAG ATCCAGAAGA ACATCATCAC CAAGCTGGTG
CTGGGGCTCT AG
 
Protein sequence
MDLAFSPEDL AFQQEVRDWI ATAYDDDLRR KVAQSKNGYL DKAGQVKWQK RLFERGWAAP 
DWPVELGGAG FTPSQRYIFN MELSLAGTPN PSPMGLKMCA PVIMAFGTPE QKAQHLPPIL
SSDIWWCQGY SEPGSGSDLA SLQMKAKRDG DDYVLNGSKI WTTHAQWADW MFCLVRTSSE
GKPQEGISFL LLPMTLPGIQ IKPLPTLDGP AEGEQEINQV FFDNVRVPVA NRIGEENKGW
TYAKYLLEFE RGNAYAPGLM HMLRKVKKIA ALERADDGGA LIEDLDFRTK IAELEIAVES
LNATELRIFS GRGAGKAVGP ASSMLKLAGS ETQQAITELA LEAVGSYAAP FVRDTWAASN
DGRAGPDYAG PAAPAYFSYR KTTIYAGSSE IQKNIITKLV LGL