More than 300 homologs were found in PanDaTox collection
for query gene Plav_0609 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
393 aa  805    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  51.49 
 
 
398 aa  402  1e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  52.25 
 
 
400 aa  403  1e-111  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.25 
 
 
400 aa  399  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  52 
 
 
397 aa  392  1e-108  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  49.25 
 
 
398 aa  390  1e-107  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  51.36 
 
 
402 aa  389  1e-107  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  48.99 
 
 
398 aa  389  1e-107  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  49.37 
 
 
399 aa  382  1e-105  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  50.25 
 
 
400 aa  384  1e-105  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  48.99 
 
 
398 aa  380  1e-104  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  48.99 
 
 
398 aa  379  1e-104  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  47.76 
 
 
402 aa  379  1e-104  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  48.99 
 
 
398 aa  379  1e-104  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  48.99 
 
 
398 aa  379  1e-104  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  49.63 
 
 
397 aa  380  1e-104  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  47.49 
 
 
398 aa  381  1e-104  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  48.26 
 
 
402 aa  379  1e-104  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  48.99 
 
 
398 aa  379  1e-104  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  48.99 
 
 
398 aa  379  1e-104  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  46.98 
 
 
398 aa  377  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  48.49 
 
 
398 aa  375  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  50.24 
 
 
404 aa  377  1e-103  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  48.74 
 
 
398 aa  377  1e-103  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  47.76 
 
 
402 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  48.49 
 
 
398 aa  375  1e-103  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  47.76 
 
 
402 aa  378  1e-103  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  48.49 
 
 
398 aa  375  1e-103  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  47.76 
 
 
402 aa  378  1e-103  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  47.99 
 
 
398 aa  372  1e-102  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  48.24 
 
 
398 aa  373  1e-102  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  47.26 
 
 
416 aa  373  1e-102  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
398 aa  373  1e-102  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  48.49 
 
 
398 aa  374  1e-102  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  47.24 
 
 
398 aa  370  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  46.77 
 
 
402 aa  368  1e-101  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  47.99 
 
 
398 aa  371  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  48.26 
 
 
402 aa  371  1e-101  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  49.5 
 
 
398 aa  371  1e-101  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  48.51 
 
 
402 aa  368  1e-100  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  47.74 
 
 
398 aa  368  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  46.77 
 
 
402 aa  365  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  48.02 
 
 
403 aa  362  6e-99  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  48.89 
 
 
402 aa  362  8e-99  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  48.89 
 
 
402 aa  362  8e-99  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  48.89 
 
 
402 aa  362  8e-99  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  48.89 
 
 
402 aa  362  8e-99  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  48.89 
 
 
402 aa  361  9e-99  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  49.25 
 
 
396 aa  360  2e-98  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  48.25 
 
 
400 aa  360  2e-98  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  48.64 
 
 
402 aa  360  2e-98  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  47.25 
 
 
396 aa  357  9.999999999999999e-98  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  46.27 
 
 
402 aa  357  1.9999999999999998e-97  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  43.8 
 
 
393 aa  357  2.9999999999999997e-97  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  43.54 
 
 
393 aa  354  1e-96  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.86 
 
 
397 aa  354  1e-96  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  43.8 
 
 
393 aa  354  1e-96  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  46.17 
 
 
403 aa  354  2e-96  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  46.17 
 
 
403 aa  353  2.9999999999999997e-96  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  47.5 
 
 
396 aa  352  8e-96  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  43.8 
 
 
393 aa  351  1e-95  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  47.62 
 
 
397 aa  351  1e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  47.38 
 
 
393 aa  350  4e-95  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  42.75 
 
 
393 aa  349  6e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  43.39 
 
 
401 aa  348  7e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  43.54 
 
 
393 aa  348  7e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  45.11 
 
 
398 aa  348  1e-94  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  47 
 
 
396 aa  347  1e-94  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  45.68 
 
 
396 aa  346  4e-94  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  43.29 
 
 
393 aa  345  6e-94  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  47.16 
 
 
403 aa  345  8.999999999999999e-94  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  48.4 
 
 
403 aa  344  1e-93  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  43.29 
 
 
393 aa  345  1e-93  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  45.3 
 
 
397 aa  343  2e-93  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  46.04 
 
 
398 aa  343  2.9999999999999997e-93  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  46.25 
 
 
396 aa  340  2e-92  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  45.77 
 
 
402 aa  340  2.9999999999999998e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.58 
 
 
411 aa  340  4e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  45.39 
 
 
399 aa  335  9e-91  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.69 
 
 
395 aa  333  2e-90  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  45.3 
 
 
411 aa  334  2e-90  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  46.23 
 
 
393 aa  333  3e-90  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  45.3 
 
 
400 aa  331  1e-89  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  45.84 
 
 
393 aa  331  1e-89  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  42.57 
 
 
379 aa  328  1.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  46.62 
 
 
386 aa  325  6e-88  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  43.21 
 
 
398 aa  323  4e-87  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  45.54 
 
 
412 aa  323  4e-87  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  42.96 
 
 
398 aa  322  8e-87  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  44.77 
 
 
404 aa  322  8e-87  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  45.52 
 
 
400 aa  322  9.000000000000001e-87  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  42.96 
 
 
398 aa  321  9.999999999999999e-87  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  42.53 
 
 
385 aa  314  1.9999999999999998e-84  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  43.04 
 
 
385 aa  312  6.999999999999999e-84  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_010512  Bcenmc03_6881  acyl-CoA dehydrogenase domain-containing protein  43.67 
 
 
400 aa  310  4e-83  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  43.46 
 
 
452 aa  310  4e-83  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009720  Xaut_1702  acyl-CoA dehydrogenase domain-containing protein  40.35 
 
 
396 aa  308  9e-83  Xanthobacter autotrophicus Py2  Bacteria  normal  0.176609  hitchhiker  0.00005108 
 
 
-
 
NC_014158  Tpau_1806  acyl-CoA dehydrogenase domain protein  43.83 
 
 
410 aa  308  1.0000000000000001e-82  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.445924  n/a   
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  43.31 
 
 
410 aa  307  2.0000000000000002e-82  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_008705  Mkms_5207  acyl-CoA dehydrogenase domain-containing protein  42.68 
 
 
399 aa  306  5.0000000000000004e-82  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
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