More than 300 homologs were found in PanDaTox collection
for query gene Gbro_3358 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009077  Mjls_1724  acyl-CoA dehydrogenase domain-containing protein  73.9 
 
 
410 aa  647    Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4379  acyl-CoA dehydrogenase domain-containing protein  73.9 
 
 
410 aa  639    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.770701  normal 
 
 
-
 
NC_008146  Mmcs_1743  acyl-CoA dehydrogenase-like protein  73.9 
 
 
410 aa  646    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1790  acyl-CoA dehydrogenase domain-containing protein  73.9 
 
 
410 aa  646    Mycobacterium sp. KMS  Bacteria  normal  0.340582  normal 
 
 
-
 
NC_013441  Gbro_3358  acyl-CoA dehydrogenase domain protein  100 
 
 
410 aa  844    Gordonia bronchialis DSM 43247  Bacteria  normal  0.72222  n/a   
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  73.66 
 
 
410 aa  640    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_014158  Tpau_1806  acyl-CoA dehydrogenase domain protein  71.46 
 
 
410 aa  615  1e-175  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.445924  n/a   
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  58.11 
 
 
411 aa  479  1e-134  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  51.46 
 
 
400 aa  419  1e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  49.4 
 
 
400 aa  382  1e-105  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.33 
 
 
411 aa  353  2.9999999999999997e-96  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  44.15 
 
 
398 aa  353  4e-96  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  43.9 
 
 
398 aa  352  8.999999999999999e-96  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  44.15 
 
 
398 aa  351  2e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  47.34 
 
 
403 aa  343  2.9999999999999997e-93  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  43.97 
 
 
452 aa  342  7e-93  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  45.91 
 
 
402 aa  340  2e-92  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  43.54 
 
 
402 aa  338  9.999999999999999e-92  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  43.72 
 
 
398 aa  337  1.9999999999999998e-91  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
398 aa  334  2e-90  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  44.63 
 
 
397 aa  333  4e-90  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  43.83 
 
 
398 aa  332  9e-90  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  44.2 
 
 
402 aa  331  2e-89  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  44.2 
 
 
402 aa  331  2e-89  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  43.51 
 
 
400 aa  330  3e-89  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  47.88 
 
 
374 aa  330  4e-89  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  44.2 
 
 
402 aa  330  4e-89  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  43.75 
 
 
400 aa  328  1.0000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  42.82 
 
 
398 aa  328  1.0000000000000001e-88  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  42.18 
 
 
398 aa  327  2.0000000000000001e-88  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  45.35 
 
 
398 aa  327  3e-88  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  43.24 
 
 
402 aa  327  3e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  45.35 
 
 
398 aa  326  6e-88  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  45.35 
 
 
398 aa  326  6e-88  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  44.87 
 
 
412 aa  325  8.000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  42.58 
 
 
398 aa  324  1e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  44.84 
 
 
402 aa  325  1e-87  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  44.88 
 
 
398 aa  324  2e-87  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  43.06 
 
 
402 aa  323  2e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  42.51 
 
 
403 aa  323  2e-87  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  44.63 
 
 
398 aa  323  3e-87  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  42.51 
 
 
403 aa  323  4e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  44.87 
 
 
398 aa  323  4e-87  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  45.11 
 
 
398 aa  322  5e-87  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  43 
 
 
416 aa  323  5e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  44.39 
 
 
398 aa  322  9.999999999999999e-87  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  43.27 
 
 
399 aa  321  1.9999999999999998e-86  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  43.68 
 
 
398 aa  320  1.9999999999999998e-86  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  44.98 
 
 
404 aa  320  3e-86  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  43.65 
 
 
397 aa  319  5e-86  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  43.68 
 
 
398 aa  319  6e-86  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  43.68 
 
 
398 aa  318  1e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  43.68 
 
 
398 aa  318  1e-85  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  43.68 
 
 
398 aa  318  1e-85  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  43.68 
 
 
398 aa  318  1e-85  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  43.68 
 
 
398 aa  318  1e-85  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  42.75 
 
 
402 aa  317  2e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  44.15 
 
 
400 aa  316  4e-85  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  42.82 
 
 
396 aa  313  2.9999999999999996e-84  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  43 
 
 
402 aa  311  2e-83  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  43.17 
 
 
403 aa  311  2e-83  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  43.69 
 
 
399 aa  310  2e-83  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
402 aa  309  5e-83  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
402 aa  309  5e-83  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
402 aa  309  5e-83  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
402 aa  309  5e-83  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
402 aa  309  5e-83  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
402 aa  309  5.9999999999999995e-83  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  41.67 
 
 
397 aa  308  9e-83  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  43.78 
 
 
402 aa  307  2.0000000000000002e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  42.76 
 
 
398 aa  306  3e-82  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  41.93 
 
 
396 aa  305  9.000000000000001e-82  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  40.34 
 
 
398 aa  303  3.0000000000000004e-81  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  42.24 
 
 
398 aa  303  3.0000000000000004e-81  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  41.22 
 
 
397 aa  303  4.0000000000000003e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  43.1 
 
 
393 aa  303  4.0000000000000003e-81  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  43.33 
 
 
400 aa  302  8.000000000000001e-81  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  41.02 
 
 
404 aa  301  1e-80  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  41.25 
 
 
393 aa  301  2e-80  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  41.2 
 
 
396 aa  299  5e-80  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  41.45 
 
 
396 aa  298  1e-79  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  40.44 
 
 
393 aa  298  1e-79  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  42.2 
 
 
386 aa  296  3e-79  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_010512  Bcenmc03_6832  acyl-CoA dehydrogenase domain-containing protein  43.71 
 
 
403 aa  296  5e-79  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.111303  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  41.46 
 
 
397 aa  296  6e-79  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  42.2 
 
 
398 aa  295  8e-79  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  40.58 
 
 
396 aa  294  2e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  42.09 
 
 
393 aa  293  4e-78  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  40.83 
 
 
393 aa  290  4e-77  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  40.34 
 
 
386 aa  289  8e-77  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  40.43 
 
 
396 aa  288  1e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  39.81 
 
 
398 aa  288  1e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  41.12 
 
 
393 aa  286  5.999999999999999e-76  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  40.59 
 
 
401 aa  285  9e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  40.1 
 
 
393 aa  283  5.000000000000001e-75  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  41.89 
 
 
393 aa  281  1e-74  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  40.88 
 
 
393 aa  278  9e-74  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  40.34 
 
 
402 aa  278  2e-73  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  40.88 
 
 
393 aa  277  2e-73  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  40.15 
 
 
395 aa  276  4e-73  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
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