Gene Rfer_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2593 
Symbol 
ID3962001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2854885 
End bp2856093 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content60% 
IMG OID637917411 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_523840 
Protein GI89901369 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGA ATTTCACCCC GGAAGAAGAA ATTTTTCGCA ATGAAGTGCG CACTTTCCTG 
GCCGACAAAC TGCCGGCCCG CCTGTCCGAC AAGGTCGCCA ATGGCAAGCA CCTCTCCAAG
GCCGACATGC AGGAATGGCA TGCGATCCTC AATACACGTG GCTGGCTCGC AAACCACTGG
CCCGTGGCGT ATGGCGGCCC GGGCTGGAGC GCGGTCGAGA AATTTATTTT CGAGCACGAA
TGTTGCCTCG CCAGCGCGCC GCGCATTGTT CCTTTCGGTG TCAACATGCT GGGGCCCGTC
CTGATCAAGT TTGGCAACGA GACGCAGAAG CGTCACTGGC TGCCGCGCAT TCTCGACGGT
TCCGACTGGT GGTGCCAGGG TTACTCGGAA ACTGGCGCGG GCTCGGACCT GGCGGCGGTC
AGCACCACCG CCCTGCGCGG CCACGATGCA CAGGGTGATC ACTATATTGT CAACGGCCAG
AAGGCCTGGA CCACGCTGGG CCAGCACGCC AACATGATCT TCTGCCTGGT GCGCACCAAT
CGCGAGGCCA AGAAACAGGA AGGCATCAGC TTCCTGTTGA TTGACATGAC GACACCCGGC
GTTGAGGTGC GCCCTGTCAT CACCCTCGAC GGTGTGCACG AAGTCAACGA GGTATTTTTC
ACCGACGTGC GCGTGCCGGC CGAAAACCTG GTCGGCGAGG AAGACAAGGG CTGGACCTGC
GCCAAATACC TGTTGACCTA CGAACGCACC AACATCGCTG GCGTGGGCCT CTCCGTGGCG
GCGCTTCAGC GACTCAAGCG TATCGCTGCA CAGCAGATGC GCAACGGCCG GCCTTTGGCA
GAGGATCCGT CGTTTGCAGC CCGTATGGCG CGTGTTGAGA TCGATCTTGA GAACATGAAG
ACCACCAACC TGCGCATGAT CGCGGCTGTC GTGGGTGGTG GCGTGCCAGG GGCCGAGAGC
TCGATGCTGA AGATACGCGG CACGCAGATC CGACAGGAGA TATCGTCGCT GAACCGGCGC
GCCATGGGGC CTTATGCGCG ACCTTTTATC ACCGAGGCGC TGGAAGACGA TTACACCGGC
ATGCAAGTCG GCCCCGAGGC TGCAGCCAGC GCGGCGGCAC TCTACTTCAA CAACCGCAAG
CTGTCGATCT TCGGCGGCTC CAATGAAATT CAGAAAAACA TCATCTCCAA GATGATTCTT
GGACTGTGA
 
Protein sequence
MDLNFTPEEE IFRNEVRTFL ADKLPARLSD KVANGKHLSK ADMQEWHAIL NTRGWLANHW 
PVAYGGPGWS AVEKFIFEHE CCLASAPRIV PFGVNMLGPV LIKFGNETQK RHWLPRILDG
SDWWCQGYSE TGAGSDLAAV STTALRGHDA QGDHYIVNGQ KAWTTLGQHA NMIFCLVRTN
REAKKQEGIS FLLIDMTTPG VEVRPVITLD GVHEVNEVFF TDVRVPAENL VGEEDKGWTC
AKYLLTYERT NIAGVGLSVA ALQRLKRIAA QQMRNGRPLA EDPSFAARMA RVEIDLENMK
TTNLRMIAAV VGGGVPGAES SMLKIRGTQI RQEISSLNRR AMGPYARPFI TEALEDDYTG
MQVGPEAAAS AAALYFNNRK LSIFGGSNEI QKNIISKMIL GL