| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0842 |
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| Symbol | |
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| ID | 7972057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 927919 |
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| End bp | 929127 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791440 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002942761 |
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| Protein GI | 239813851 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0566206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA ATTTCACGAC CGAAGAAGAA GCCTTCCGCA GCGAAGTGCG CGCCTTCCTG
GCCGCAAAAC TGCCGGTGCG GCTGTCCGAG AAAGTGCGCG GCGGCAAAAT CCTCGCCAAG
GCCGACATGC AGGAATGGCA CGCCATCCTC AACGAGCGCG GCTGGCTCGC CAACCACTGG
CCCGAGCAGT ACGGCGGCCC GGGCTGGACG GCGGTAGAGA AGTTCATCTT CGAACACGAA
TGCGCGCTGG CATTTGCGCC ACGCATCGTG CCCTTCGGCG TGAACATGCT CGGCCCGGTG
CTCATCAAGT ACGGCAACGA GGCGCAGAAG CGCCACTGGC TGCCGCGCAT CCTGAACGGT
GCCGACTGGT GGTGCCAGGG CTATTCGGAA CCCGGCGCGG GCTCCGACCT CGCGGCCGTG
AAGACCTCGG CCGTGCGCGG CATCGACGCC CAGGGCGACC ACTACATCGT GAACGGCCAG
AAGACCTGGA CCACGCTGGG TCAGCACGCC AACATGATCT TCTGCCTGGT GCGCACCAAC
CGCGAGGCGA AGAAGCAGGA AGGCATCAGC TTCCTCCTGA TCGACATGAC GTCGCCCGGC
GTCGAAGTGC GCCCGATCAT CACGCTCGAC GGCGAGCATG AAGTGAACGA GGTGTTCTTC
TCCGACGTGC GCGTGCCGGC CGAGAACCTC GTGGGCGAAG AGAACAAGGG CTGGACCTGC
GCGAAGTACC TCCTGACCTA CGAGCGCACC AACATCGCGG GCGTCGGCTT CTCGGTGGCG
GCGCTCGAGC AGCTCAAGGG CATTGCGGCC ACGCAGACGA AGAACGGCAA GCCGCTGGCC
GAAGACCCGG CGTTTGCCGC ACGCATGGCG CGTGTCGAGA TCGACCTGGA GAACATGAAG
ACCACCAACC TGCGCGTGAT CGCGGCCGTG GCCGGTGGCG GCGTGCCGGG TGCGGAAAGC
TCGATGCTCA AGATCCGCGG CACCGAGATC CGGCAGGAGA TCTCGTCGCT CGCGCGCCGC
GCGATGGGCG TTTACGGCCG GCCCTTCGTC GAGGAAGCGC TGCACGACGG CTTCGACGGC
GAGACCTTCG GCCCGCCCTA CGCATCGGCC GCCGCCGCGC GCTACTTCAA CAACCGCAAG
CTGTCGATCT TCGGCGGTTC GAACGAAATC CAGAAGAACA TCATCAGCAA GATGATCCTC
GGGCTGTAA
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| Protein sequence | MDLNFTTEEE AFRSEVRAFL AAKLPVRLSE KVRGGKILAK ADMQEWHAIL NERGWLANHW
PEQYGGPGWT AVEKFIFEHE CALAFAPRIV PFGVNMLGPV LIKYGNEAQK RHWLPRILNG
ADWWCQGYSE PGAGSDLAAV KTSAVRGIDA QGDHYIVNGQ KTWTTLGQHA NMIFCLVRTN
REAKKQEGIS FLLIDMTSPG VEVRPIITLD GEHEVNEVFF SDVRVPAENL VGEENKGWTC
AKYLLTYERT NIAGVGFSVA ALEQLKGIAA TQTKNGKPLA EDPAFAARMA RVEIDLENMK
TTNLRVIAAV AGGGVPGAES SMLKIRGTEI RQEISSLARR AMGVYGRPFV EEALHDGFDG
ETFGPPYASA AAARYFNNRK LSIFGGSNEI QKNIISKMIL GL
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