| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2229 |
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| Symbol | |
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| ID | 3973227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2430792 |
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| End bp | 2431982 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925337 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_532102 |
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| Protein GI | 90423732 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03204] pimeloyl-CoA dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.033637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0664218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA GCTTCAGCAA GGACGAACTG GCGTTTCGCG ACGAGGTCCG CGCCTTCTTC
AAGGACAACG TGCCGGCGGC GTTGCGGCAG AAACTGATGG AAGGCCGCCA CCCGACCAAG
CAGGAAATGG TCGACTGGTG GCGCGTGCTC AACGCCAAAG GCTGGGGCGT GCCGCATTGG
CCGAAGCAAT ATGGTGGCAC CGGCTGGACC TCGGTGCAGG ACTACATCTT CAACGAAGAA
CTGCAGATGG CGCCGGCGCC GGCGCCCTTG GCGTTCGGCG TCTCGATGGT CGGCCCGGTG
ATCTACACCT TCGGCAACGA GGCGCAGAAA GCGCGCTTCC TGCCGCGGAT CGCTAATGTC
GACGACTGGT GGTGCCAGGG CTTCTCCGAG CCCGGCTCCG GCTCCGATCT GGCCTCGCTG
AAGACCAAGG CCGAGAAGAA GGGCGACACC TACATCGTCA ACGGCCAGAA GACCTGGACC
ACGCTGGCGC AACACGCCGA CTGGATCTTT TGTCTCTGCC GCACCGATCC CACCGCCAAG
AAGCAGTCCG GCATCTCCTT CATCCTGGTC GACATGAAGT CGAAGGGCAT CACGGTGCGG
CCGATCCAGA CCATCGACGG CTCCAGCGAA GTCAACGAGG TGTTCTTCGA CGATGTCGAG
GTGCCGGTGG AGAATCTGGT CGGCGAGGAA AACAAGGGCT GGGACTACGC CAAATTCCTG
CTCGGCAATG AACGCACCGG GATCGCCCGG GTCGGCGTCT CCAAGGAGCG CATCAAGCGC
ATCAAGGAGC TCGCCGCCAA GGTGCAGGCC GGCGGCAAGC CGGTGCTCGA GGATCAGAAA
TTCCGCGAGA AGCTGGCGCT GGTCGAGATC GAGCTGAAGG CTTTGGAATT GACCCAGCTC
CGCGTCGTCG CCAACGAGGG CAAGCACGGC AAGGGCAAGC CCGATCCGGC GTCCTCGGTG
TTGAAGATCA AGGGCTCGGA GATCCAGCAG GCCACCACCG AATTGCTGAT GAACGTGATC
GGCCCGTTCG CCGCACCTTA CGACATCCAC GGCGACGACG GCTCCAACGA GGCGATGGAC
TGGACCGCGC AGATCGCGCC TTCGTATTTC AACAACCGCA AGGTCTCGAT CTACGGCGGC
AGCAACGAGA TCCAGCGCAA CATCATCAGC AAGGCGGTGC TGGGGTTGTG A
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| Protein sequence | MDLSFSKDEL AFRDEVRAFF KDNVPAALRQ KLMEGRHPTK QEMVDWWRVL NAKGWGVPHW
PKQYGGTGWT SVQDYIFNEE LQMAPAPAPL AFGVSMVGPV IYTFGNEAQK ARFLPRIANV
DDWWCQGFSE PGSGSDLASL KTKAEKKGDT YIVNGQKTWT TLAQHADWIF CLCRTDPTAK
KQSGISFILV DMKSKGITVR PIQTIDGSSE VNEVFFDDVE VPVENLVGEE NKGWDYAKFL
LGNERTGIAR VGVSKERIKR IKELAAKVQA GGKPVLEDQK FREKLALVEI ELKALELTQL
RVVANEGKHG KGKPDPASSV LKIKGSEIQQ ATTELLMNVI GPFAAPYDIH GDDGSNEAMD
WTAQIAPSYF NNRKVSIYGG SNEIQRNIIS KAVLGL
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