| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_1965 |
|---|
| Symbol | |
|---|
| ID | 4645812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 2096839 |
|---|
| End bp | 2098071 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639805452 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_952790 |
|---|
| Protein GI | 120402961 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.180628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGG AGTGGTCGGC CACCGACCTG GCGTTCCGCG ACGAGGTGCG GGCCTTTCTC
GACGACAGGT TGACCCCTGA ACTGCGCCGC GCCGGACGCC TGATGACCAG CGTGTACGCC
GACCACGATG CGAGCATGGC GTGGCAGCAG ATCCTGCACG AGCGCGGCTG GGCGGCACCG
GCGTGGCCGG TGGCCCACGG CGGCTGCGAC TGGAGCCTGA CCCAGCACTA CATCTTCAGC
CGGGAGTCCA CCCTGGCGGG CGCGCCGTCA CTGTCGCCGA TGGGAATCAG GATGGTCGCC
CACGCGATCA TCAGGTTCGG CTCCGACGAG CAAAAGAACT ACTTCTTGCC GCGCATCCTC
ACCGGCGAGG TCTTCTTCTG CCAGGGCTAC TCGGAGCCGG AGGCCGGCTC CGATCTCGCC
GCGCTGTCGA TGGCGGCCCG TGACGACGGG GATCACCTGG TCTGCACCGG CAGCAAGATC
TGGACCACGC ACGCCCGGGA AGCCAACTGG ATGTTCGCAC TGGTGCGCAC CACCCGCTCG
GAGAAGAAGC AGCGGGGCAT CACGTTCGTC CTGATCGACA TGTCGACACC GGGCATCGAG
ATCCGACCGC TGGTGATGAC CTCCGGCGAA GAGGTGCAGA ACCAGGTCTT CTTCGACGAC
GTGCGCGTGC CGAAGGCCAA CGTCATCGGT GAGATCGACG ACGGCTGGAC CGTGGCCAAG
TACCTGCTGG AGTTCGAACG CGGCGGTGGC GCCTCCGCCC CGGCCCTCCA GGTGATGGTC
GAGGAGATCA CCACCGCGGC CGCCGGACAA CCCGGCCCCT CCGGCGGACG GCTTCTCGAT
GATCCCGCCT TCGCGCGCAA GCTCGCCGAC GTCCGGATCC GCACCGAGGT CCTGGAAATC
CTCGAGTACC AGGTACTGGC CGCGGTGGCC GAAGGCGGTA ACCCCGGAGC GAAGTCGTCG
ATGCTCAAGG TGCTCAGCAC CGAGCTCAGC CAAGCCATCA CCGAACTGGC CATGGAGGCC
GCCGGCCCCC GCGGACGGGT GTATCAACCG CATGCGACGT GTCCCGGCGG ACCCATCGCC
GAGTTCGAGC CGCCCGCCGA TGATTACGTC AGCGGCGAAC CCTGGCAGGC CGTCGCACCA
CTGCGGTACT TCAATGACCG CGCCGGCTCG ATCTATGCCG GGAGCAACGA AATTCAGCGC
AATATCCTCG CCAAGGCTGC ATTGGGGCTG TAG
|
|---|
| Protein sequence | MDLEWSATDL AFRDEVRAFL DDRLTPELRR AGRLMTSVYA DHDASMAWQQ ILHERGWAAP
AWPVAHGGCD WSLTQHYIFS RESTLAGAPS LSPMGIRMVA HAIIRFGSDE QKNYFLPRIL
TGEVFFCQGY SEPEAGSDLA ALSMAARDDG DHLVCTGSKI WTTHAREANW MFALVRTTRS
EKKQRGITFV LIDMSTPGIE IRPLVMTSGE EVQNQVFFDD VRVPKANVIG EIDDGWTVAK
YLLEFERGGG ASAPALQVMV EEITTAAAGQ PGPSGGRLLD DPAFARKLAD VRIRTEVLEI
LEYQVLAAVA EGGNPGAKSS MLKVLSTELS QAITELAMEA AGPRGRVYQP HATCPGGPIA
EFEPPADDYV SGEPWQAVAP LRYFNDRAGS IYAGSNEIQR NILAKAALGL
|
|---|
| |