Gene Bpro_3845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3845 
Symbol 
ID4013486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp4035804 
End bp4036985 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID637943498 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_550641 
Protein GI91789689 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.634206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAG CTTTCACCCC TGAAGAGCAG GCATTTCGCG AAGAAATACG CGCCTGGGTT 
CATGCCAGCC TGCCCCAAGA CATTTCGCAC AAGGTGCACA ACGCCTTGCG CCTGTCGCGT
GATGACATGC AGCGCTGGGC CAAAATCCTG GGCAAAAAAG GCTGGCTGGG CCACGGCTGG
CCCAAGGAAT TTGGCGGCCC GGGCTGGAAC GCCGTGCAAA AACACCTGTT TGAAGAAGAA
TGCGCGCTGG CTGGCGCGCC GCGTGTTGTG CCATTCGGCC CCGTGATGGT GGCCCCCGTC
ATCATGGCCT TCGGCAATGC CGAGCAGCAA AAGCGCTTTC TGCCGGGCAT CGCCAGCGGC
GACGTCTGGT GGAGCCAGGG CTACAGCGAG CCAGGCTCCG GCTCCGACCT TGCATCGGTC
AAATGCCGGG CCGAACGGCA GGGCGACAAA TACATCGTCA ATGGCCAGAA AACCTGGACC
ACGCTGGGCC AGTACGGCGA ATGGATTTTC TGCCTGGTGC GCACCAGCAC AGAGGGCAAA
CCGCAAACCG GCATCTCCTT TTTGCTGATC GACATGAAGT CGCCCGGCGT CACGGTGCGG
CCCATCAAGC TGCTCGATGG CGAAAGCGAA GTCAACGAGG TCTGGTTCGA CAACGTGGAA
GTGCCCGCGG AAAATCTGAT CGGCGAGGAA AACAAGGGCT GGACCTACGC CAAGCACCTG
CTCAGCCACG AGCGCACCAA CATTGCCGAC GTCAATCGCG CCAAGCGCGA ACTGGAACGA
CTCAAGCGCA TCGCCAAAAC GGAAAACGTT TATGACGACA TGCGGTTTGG CGACGAGATC
GCCAAGCTCG AAGTGGATGT GGTGGCGCTG GAAATGCTGG TGCTGCGCGT GCTGTCCGCT
GAAAAATCCG GCAAGAACTC GCTGGACATC GCCGGGCTGC TCAAGATCCG GGGCAGCGAG
ATCCAGCAGC GCTACAGCGA ACTGATGATG CTGGCCGCCG GCCCGTTCAG CCTGCCTTTC
ATCGAGGAGG CCATGGAAGC GGGCTGGCAG GGCAACTTCC CGGGCGGCGT GCTGGCCAAT
GCGCCGCTGG CGTCCACCTA TTTCAACATG CGCAAAACCA CGATTTACGG CGGCTCCAAC
GAGGTCCAGC GAAATATCGT TTCACAAGTC GTTTTGGGTT AA
 
Protein sequence
MDLAFTPEEQ AFREEIRAWV HASLPQDISH KVHNALRLSR DDMQRWAKIL GKKGWLGHGW 
PKEFGGPGWN AVQKHLFEEE CALAGAPRVV PFGPVMVAPV IMAFGNAEQQ KRFLPGIASG
DVWWSQGYSE PGSGSDLASV KCRAERQGDK YIVNGQKTWT TLGQYGEWIF CLVRTSTEGK
PQTGISFLLI DMKSPGVTVR PIKLLDGESE VNEVWFDNVE VPAENLIGEE NKGWTYAKHL
LSHERTNIAD VNRAKRELER LKRIAKTENV YDDMRFGDEI AKLEVDVVAL EMLVLRVLSA
EKSGKNSLDI AGLLKIRGSE IQQRYSELMM LAAGPFSLPF IEEAMEAGWQ GNFPGGVLAN
APLASTYFNM RKTTIYGGSN EVQRNIVSQV VLG