More than 300 homologs were found in PanDaTox collection
for query gene Rmet_3803 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  87.91 
 
 
397 aa  737    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  81.91 
 
 
398 aa  685    Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  100 
 
 
397 aa  818    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  57.64 
 
 
398 aa  479  1e-134  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  56.78 
 
 
398 aa  478  1e-134  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  56.78 
 
 
398 aa  477  1e-133  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  58.15 
 
 
398 aa  475  1e-133  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  57.86 
 
 
400 aa  471  1e-132  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  58.15 
 
 
398 aa  474  1e-132  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  58.15 
 
 
398 aa  474  1e-132  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  58.15 
 
 
398 aa  474  1e-132  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  58.15 
 
 
398 aa  474  1e-132  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  58.15 
 
 
398 aa  474  1e-132  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  58.15 
 
 
398 aa  474  1e-132  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  57.61 
 
 
400 aa  468  9.999999999999999e-131  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  56.39 
 
 
398 aa  464  9.999999999999999e-131  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  56.14 
 
 
398 aa  464  1e-129  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  55.64 
 
 
398 aa  462  1e-129  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  55.89 
 
 
398 aa  462  1e-129  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  55.89 
 
 
398 aa  462  1e-129  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  56.14 
 
 
398 aa  463  1e-129  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  55.89 
 
 
398 aa  462  1e-129  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  55.83 
 
 
402 aa  460  9.999999999999999e-129  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  56.39 
 
 
398 aa  456  1e-127  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  54.89 
 
 
398 aa  454  1.0000000000000001e-126  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  53.62 
 
 
396 aa  454  1.0000000000000001e-126  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  55.36 
 
 
400 aa  451  1.0000000000000001e-126  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  54.14 
 
 
398 aa  450  1e-125  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  55.09 
 
 
402 aa  448  1e-125  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  53.12 
 
 
396 aa  448  1.0000000000000001e-124  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  54.59 
 
 
402 aa  447  1.0000000000000001e-124  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  56.64 
 
 
393 aa  442  1e-123  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  56.39 
 
 
393 aa  443  1e-123  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  52.62 
 
 
396 aa  442  1e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  53.88 
 
 
397 aa  441  9.999999999999999e-123  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  52.37 
 
 
396 aa  436  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  54.95 
 
 
416 aa  435  1e-121  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  54.5 
 
 
397 aa  436  1e-121  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  54.46 
 
 
402 aa  432  1e-120  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  55.14 
 
 
393 aa  431  1e-120  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  55.39 
 
 
393 aa  429  1e-119  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  54.39 
 
 
393 aa  431  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  53.85 
 
 
402 aa  428  1e-119  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  54.61 
 
 
393 aa  425  1e-118  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  52.35 
 
 
403 aa  425  1e-118  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  54.5 
 
 
398 aa  425  1e-118  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  53.88 
 
 
397 aa  426  1e-118  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  55.39 
 
 
393 aa  428  1e-118  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  53.71 
 
 
403 aa  425  1e-118  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  51.62 
 
 
396 aa  425  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  53.71 
 
 
403 aa  424  1e-117  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  53.1 
 
 
402 aa  418  1e-116  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  54.3 
 
 
401 aa  419  1e-116  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  52.62 
 
 
399 aa  419  1e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  52.48 
 
 
402 aa  416  9.999999999999999e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  52.5 
 
 
398 aa  417  9.999999999999999e-116  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  54.39 
 
 
393 aa  415  9.999999999999999e-116  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
404 aa  413  1e-114  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  51.87 
 
 
398 aa  412  1e-114  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  52.23 
 
 
402 aa  414  1e-114  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  52.62 
 
 
398 aa  413  1e-114  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  52.23 
 
 
402 aa  414  1e-114  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
402 aa  408  1e-113  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
402 aa  408  1e-113  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
402 aa  408  1e-113  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
402 aa  408  1e-113  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
402 aa  408  1e-113  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  52.48 
 
 
402 aa  406  1.0000000000000001e-112  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  52.36 
 
 
393 aa  405  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  51.85 
 
 
403 aa  404  1e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  51.99 
 
 
400 aa  394  1e-108  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.87 
 
 
395 aa  391  1e-108  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  50.74 
 
 
402 aa  394  1e-108  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  50.5 
 
 
402 aa  392  1e-108  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  50.13 
 
 
386 aa  391  1e-107  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5498  acyl-CoA dehydrogenase domain-containing protein  50.38 
 
 
399 aa  390  1e-107  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0690  acyl-CoA dehydrogenase domain protein  48.88 
 
 
398 aa  391  1e-107  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_5118  acyl-CoA dehydrogenase-like protein  50.38 
 
 
399 aa  390  1e-107  Mycobacterium sp. MCS  Bacteria  normal  0.840312  n/a   
 
 
-
 
NC_008705  Mkms_5207  acyl-CoA dehydrogenase domain-containing protein  50.38 
 
 
399 aa  390  1e-107  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  48.37 
 
 
385 aa  385  1e-106  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  48.4 
 
 
402 aa  382  1e-105  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  47.87 
 
 
385 aa  384  1e-105  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
379 aa  384  1e-105  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  48.12 
 
 
399 aa  379  1e-104  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  48.88 
 
 
386 aa  377  1e-103  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_013757  Gobs_2179  acyl-CoA dehydrogenase domain protein  51.13 
 
 
391 aa  372  1e-102  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  48.48 
 
 
393 aa  374  1e-102  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3726  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
383 aa  370  1e-101  Nocardioides sp. JS614  Bacteria  normal  0.018504  n/a   
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  47.62 
 
 
396 aa  354  2e-96  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  46.23 
 
 
393 aa  352  5e-96  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  46.04 
 
 
398 aa  349  6e-95  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  45.79 
 
 
398 aa  348  9e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  44.83 
 
 
400 aa  348  1e-94  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_009720  Xaut_1702  acyl-CoA dehydrogenase domain-containing protein  45.48 
 
 
396 aa  346  4e-94  Xanthobacter autotrophicus Py2  Bacteria  normal  0.176609  hitchhiker  0.00005108 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  45.79 
 
 
398 aa  346  5e-94  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  45.57 
 
 
403 aa  344  2e-93  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  47.62 
 
 
393 aa  342  8e-93  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_007348  Reut_B4559  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.77 
 
 
382 aa  340  2.9999999999999998e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.308203  n/a   
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  46.88 
 
 
399 aa  340  2.9999999999999998e-92  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  43.92 
 
 
400 aa  339  4e-92  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
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