| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0105 |
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| Symbol | |
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| ID | 4171787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 118957 |
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| End bp | 120147 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053104 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_659691 |
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| Protein GI | 109896436 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAG TGGATATTAC CTTTTCGGCT GAGGAATTAG CCTTTCGTGA CCAAGTGCGC
GAATTTTTAG CAGAGAATTG GACCGAAGAT TTAGCACGCA GGATCCGTGG TGAAGATGAA
GAGTTCAAAG CGGCGCAAAT CGAGTGGCAG AACAAACTAA ATGACAAAGG CTGGTTAGCC
CCAGGCTGGC CAGTAGAGCA TGGCGGTGTT GCTTGGTCAG TGACTGAAAA CTTCATTTTT
GAGACCGAGC GTTCACTTGC AGGCGCCCCT GATGTGGTGC CTTTTGGCCT AAAAATGGTT
GCACCGGTTA TTTATGGCTT CGGTAACGAC GAACAGAAAA AACGCTTTTT ACCACGCATT
CTTAAAAGCC AAGATTGGTG GTGTCAAGGT TACTCAGAGC CAGGTGCAGG TTCTGATTTA
GCCGCACTAA AAACAAAAGC AGAATTAGAC GGTGATGATT ACATTGTTAA CGGCGCTAAG
GTGTGGACTA CCTACGCCCA ATACGCCGAC TGGATTTTCT GTCTCGTGCG CACCGACTCA
TCAGGTAAGC GTCAAGACGG TATCAGTTTC TTACTGATTG ATATGAAGAG CCCAGGCATT
ACCGTGAATA AAATCTCCTC CATTGACGAT CATCACAGCT TGAATGAAGT GGTGTTCGAC
AACGTGCGCG TTCCCGTGGC TAATCGCATC GGCGAGCAAG ATAAAGGTTG GACCTACGCC
AAAGCCTTGT TAGCACACGA GCGTACTTCG ATTGCTGCTG TGGCTGACTC AAAGCGCCGT
TTGCGTGACT TGCGCAAGTT ACTCAGTGAA GAAATCAGCG GCGGGCGCCC ACTGATCGAA
GACGTGCAAT TCCAAAATCG CTTGTCGAAC ACAGAAATAG AGTTGATGGC ATTGGAATAC
ACCGAGCTTC GCGTTCTGGC GTCAACAGCA GATGGCAAAG GGCCGGGCGT GGAATCTTCG
TTGCTAAAAA TTAAAGGTAC CGAAATTCAA CAAGCTATCC AACAGATGTA CATGGACTTA
GCGGGTTATT ACAGCGGTGT GCTACACGGC GATGAAACCG CTGAAAGTAT TGGTCACGCC
TTTGGTCACG ACGCAAGAAA AGCATATATG TACGGACGAG CCGCCACTAT CTACGGTGGT
TCAAACGAAG TGCAGAAAAA CATTACCGCT AAATACGTAC TGGGTCTTTA A
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| Protein sequence | MQQVDITFSA EELAFRDQVR EFLAENWTED LARRIRGEDE EFKAAQIEWQ NKLNDKGWLA
PGWPVEHGGV AWSVTENFIF ETERSLAGAP DVVPFGLKMV APVIYGFGND EQKKRFLPRI
LKSQDWWCQG YSEPGAGSDL AALKTKAELD GDDYIVNGAK VWTTYAQYAD WIFCLVRTDS
SGKRQDGISF LLIDMKSPGI TVNKISSIDD HHSLNEVVFD NVRVPVANRI GEQDKGWTYA
KALLAHERTS IAAVADSKRR LRDLRKLLSE EISGGRPLIE DVQFQNRLSN TEIELMALEY
TELRVLASTA DGKGPGVESS LLKIKGTEIQ QAIQQMYMDL AGYYSGVLHG DETAESIGHA
FGHDARKAYM YGRAATIYGG SNEVQKNITA KYVLGL
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