| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2018 |
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| Symbol | |
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| ID | 5454573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2205900 |
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| End bp | 2207135 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640877595 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001413289 |
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| Protein GI | 154252465 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.642987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTTG GCTACAGCGT GGCCGATGCC GCCTTTCGCG ACGAGGTGCG AAACTTTCTG
GACGAGAAGC TGACACCGGA GCTGCGTGCC ACGGGCAAGC GGATGACAAG TGTCTATGCC
GATTATGAAA CGACCATGAC CTGGCACAAG GCGCTTTACG AAAAGGGCTG GGTCGCGCCG
TCATGGCCTG TTGAATATGG CGGGTGTGAC TGGTCTGTAA TCCAGCACTA CATTTTTTCG
AGCGAACTTT CCGCCGCCGG CGCGCCCTCG CTTTCGCCGA TGGGCCTCGG CATGTGCGGA
CCGGTGCTCA TCGGCTACGG CACACCCGAG CAAAAAGCCT ATTACCTGCC GCGTATCCTC
AACGGAGAGG ATTTCTGGTG TCAGGGTTAT TCGGAGCCGG GCTCGGGCTC CGACCTCGCC
AGCCTGCAGA TGAGCGCCGT CTCCGATGGC GACGACTTCA TATACAACGG CCAGAAAATC
TGGACGACGC ATGCGAATTA CGCAAACCGG ATTTTCAATC TCGTCCGCAC GTCGAAGGAG
GATATCCCCC AGCGCGGCAT CACCTTCATC CTGATAGACA TGGACATGCC TGGCGTGAAG
GTCGAACCGC TGGTGATGCT GTCGGGCGAG CACATCCAGA ACCAGATCTT CTTCACGGAT
GTGCGCGTGC CGAAGATGAA CGTCGTCGGC AAGGTGGGTG ATGGCTGGAC GGTGGCGAAA
TATCTGATGC AGTTCGAGCG CGGCGGCCAT GCCTATGCGC CGGGCCTGCA CACGCGGCTC
AGCCGCATTG CCCGGATGGC GGGCGAGGAA AGCGGCAATG GTGGCGGACG GCTGATCGAC
GACCCGGATT TCGCAACCAA ACTCGCTGAA GCGTCGGTGG AAATTTCCAG CCTCGAATAT
ACCGAACACC GCATCATGTC GGCGTTGAGC CATGGCGAGG CACCGGGCGC GGAATCCTCG
CTGTTGAAAA CGCGTGGCAC CGAAATCAGC CAGCGCGTGA CGGAACTGGC GCTCGAAGCC
GTGGCCTATT ACGCCCTGCC CTTCCAGCCG CATGCGACGG CGCCGGGAGG CCCCGTGCCG
GGCGCACCCT CCATCACGCC GAACGAAACA CCGGTCGGCC CCGATTATTC ATGGCCGGTG
ACGGCGAAAT ATCTCAACGA CCGCGCCGGC TCCATCTATG CGGGCACCAA CGAAATTCAG
CGCAACATCA TGGCGAAGGC CGTGCTGGGA CTCTAG
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| Protein sequence | MELGYSVADA AFRDEVRNFL DEKLTPELRA TGKRMTSVYA DYETTMTWHK ALYEKGWVAP
SWPVEYGGCD WSVIQHYIFS SELSAAGAPS LSPMGLGMCG PVLIGYGTPE QKAYYLPRIL
NGEDFWCQGY SEPGSGSDLA SLQMSAVSDG DDFIYNGQKI WTTHANYANR IFNLVRTSKE
DIPQRGITFI LIDMDMPGVK VEPLVMLSGE HIQNQIFFTD VRVPKMNVVG KVGDGWTVAK
YLMQFERGGH AYAPGLHTRL SRIARMAGEE SGNGGGRLID DPDFATKLAE ASVEISSLEY
TEHRIMSALS HGEAPGAESS LLKTRGTEIS QRVTELALEA VAYYALPFQP HATAPGGPVP
GAPSITPNET PVGPDYSWPV TAKYLNDRAG SIYAGTNEIQ RNIMAKAVLG L
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