More than 300 homologs were found in PanDaTox collection
for query gene Rpic_2197 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  77.39 
 
 
398 aa  674    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  77.39 
 
 
398 aa  674    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  92.71 
 
 
398 aa  779    Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  85 
 
 
400 aa  720    Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  97.74 
 
 
398 aa  812    Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  77.39 
 
 
398 aa  674    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  77.89 
 
 
398 aa  672    Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  77.14 
 
 
398 aa  669    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  77.14 
 
 
398 aa  651    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  75.88 
 
 
398 aa  655    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  86 
 
 
400 aa  722    Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  77.89 
 
 
398 aa  672    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  77.64 
 
 
398 aa  667    Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  77.64 
 
 
398 aa  671    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  76.63 
 
 
398 aa  659    Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  77.39 
 
 
398 aa  674    Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  77.64 
 
 
398 aa  667    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  77.64 
 
 
398 aa  671    Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  77.39 
 
 
398 aa  675    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  100 
 
 
398 aa  828    Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  76.88 
 
 
398 aa  659    Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  77.39 
 
 
398 aa  674    Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  66.58 
 
 
397 aa  559  1e-158  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  59.8 
 
 
397 aa  495  1e-139  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  60.05 
 
 
398 aa  494  1e-139  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  59.6 
 
 
400 aa  491  9.999999999999999e-139  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  57.79 
 
 
397 aa  491  1e-137  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  59.2 
 
 
402 aa  490  1e-137  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  57.96 
 
 
416 aa  490  1e-137  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  60.3 
 
 
397 aa  489  1e-137  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  57.46 
 
 
402 aa  488  1e-137  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  59.3 
 
 
398 aa  490  1e-137  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  59.05 
 
 
398 aa  489  1e-137  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_007509  Bcep18194_C7146  Acyl-CoA dehydrogenase-like  57.79 
 
 
398 aa  485  1e-136  Burkholderia sp. 383  Bacteria  normal  0.333486  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  58.71 
 
 
402 aa  488  1e-136  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  58.71 
 
 
402 aa  488  1e-136  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  59.2 
 
 
402 aa  484  1e-135  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  58.56 
 
 
402 aa  482  1e-135  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  58.21 
 
 
402 aa  482  1e-135  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  58.21 
 
 
402 aa  484  1e-135  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  56.78 
 
 
397 aa  478  1e-134  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  57.74 
 
 
396 aa  478  1e-134  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  58.06 
 
 
403 aa  475  1e-133  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  58.31 
 
 
403 aa  477  1e-133  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  58.31 
 
 
403 aa  476  1e-133  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  57.96 
 
 
402 aa  473  1e-132  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  56.72 
 
 
402 aa  472  1e-132  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  57.96 
 
 
402 aa  472  1e-132  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  56.47 
 
 
402 aa  473  1e-132  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  58.17 
 
 
396 aa  474  1e-132  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  58 
 
 
396 aa  473  1e-132  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  57.96 
 
 
402 aa  473  1e-132  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  57.96 
 
 
402 aa  473  1e-132  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  57.96 
 
 
402 aa  473  1e-132  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  57.96 
 
 
402 aa  473  1e-132  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  59 
 
 
400 aa  470  1.0000000000000001e-131  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  57.21 
 
 
402 aa  470  1.0000000000000001e-131  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  56.51 
 
 
396 aa  468  9.999999999999999e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  58.54 
 
 
393 aa  467  9.999999999999999e-131  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  55.77 
 
 
396 aa  465  9.999999999999999e-131  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  57.61 
 
 
393 aa  462  1e-129  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  57.04 
 
 
404 aa  460  9.999999999999999e-129  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  56.22 
 
 
403 aa  455  1e-127  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  56.86 
 
 
393 aa  457  1e-127  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3224  acyl-CoA dehydrogenase domain-containing protein  57.86 
 
 
393 aa  457  1e-127  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  56.86 
 
 
393 aa  452  1.0000000000000001e-126  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_007908  Rfer_1646  acyl-CoA dehydrogenase-like  57.11 
 
 
393 aa  454  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  0.765479  n/a   
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  54.75 
 
 
398 aa  449  1e-125  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  55.91 
 
 
401 aa  448  1e-125  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  56.61 
 
 
393 aa  449  1e-125  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  55.53 
 
 
393 aa  445  1.0000000000000001e-124  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  54.02 
 
 
393 aa  440  9.999999999999999e-123  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  54.39 
 
 
399 aa  436  1e-121  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
399 aa  421  1e-116  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  53.98 
 
 
379 aa  419  1e-116  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  53.62 
 
 
393 aa  414  9.999999999999999e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_013441  Gbro_0690  acyl-CoA dehydrogenase domain protein  52.1 
 
 
398 aa  416  9.999999999999999e-116  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2179  acyl-CoA dehydrogenase domain protein  53.75 
 
 
391 aa  409  1e-113  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  52.27 
 
 
393 aa  411  1e-113  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4379  acyl-CoA dehydrogenase domain-containing protein  50.88 
 
 
385 aa  408  1e-113  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.627573  normal 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  50.5 
 
 
402 aa  408  1.0000000000000001e-112  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.5 
 
 
395 aa  402  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009338  Mflv_2287  acyl-CoA dehydrogenase domain-containing protein  50.63 
 
 
385 aa  403  1e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_5207  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
399 aa  398  1e-109  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5118  acyl-CoA dehydrogenase-like protein  49.75 
 
 
399 aa  398  1e-109  Mycobacterium sp. MCS  Bacteria  normal  0.840312  n/a   
 
 
-
 
NC_009077  Mjls_5498  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
399 aa  398  1e-109  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  49.25 
 
 
386 aa  397  1e-109  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  49.75 
 
 
396 aa  394  1e-108  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.64 
 
 
411 aa  385  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_008699  Noca_3726  acyl-CoA dehydrogenase domain-containing protein  51.12 
 
 
383 aa  385  1e-106  Nocardioides sp. JS614  Bacteria  normal  0.018504  n/a   
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  48.99 
 
 
393 aa  384  1e-105  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  47.32 
 
 
400 aa  379  1e-104  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  46.53 
 
 
398 aa  375  1e-103  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  48.17 
 
 
403 aa  375  1e-103  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  46.29 
 
 
398 aa  375  1e-102  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  46.04 
 
 
398 aa  370  1e-101  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  46.1 
 
 
386 aa  369  1e-101  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  46.1 
 
 
412 aa  365  1e-100  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_007794  Saro_1568  acyl-CoA dehydrogenase-like  45.91 
 
 
395 aa  364  2e-99  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.164987  n/a   
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  45.54 
 
 
400 aa  358  9.999999999999999e-98  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
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