More than 300 homologs were found in PanDaTox collection
for query gene Rmet_0845 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  100 
 
 
398 aa  810    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  50.75 
 
 
398 aa  418  1e-116  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  50.75 
 
 
398 aa  417  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  50.49 
 
 
398 aa  414  1e-114  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  48.28 
 
 
400 aa  398  1e-109  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  49.26 
 
 
404 aa  379  1e-104  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  46.53 
 
 
452 aa  367  1e-100  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_010681  Bphyt_2737  acyl-CoA dehydrogenase domain protein  46.84 
 
 
402 aa  354  1e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  0.944571  normal 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  46.72 
 
 
402 aa  354  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  47.03 
 
 
398 aa  353  2.9999999999999997e-96  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  45.91 
 
 
402 aa  350  2e-95  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_010002  Daci_1395  acyl-CoA dehydrogenase domain-containing protein  44.78 
 
 
398 aa  350  4e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  46.62 
 
 
393 aa  349  5e-95  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  46.15 
 
 
398 aa  348  7e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  45.85 
 
 
402 aa  348  1e-94  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  46.02 
 
 
400 aa  347  2e-94  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  43.75 
 
 
397 aa  346  3e-94  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  46.4 
 
 
400 aa  346  5e-94  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3737  acyl-CoA dehydrogenase domain-containing protein  45.17 
 
 
403 aa  345  5e-94  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3018  acyl-CoA dehydrogenase domain protein  45.17 
 
 
403 aa  345  7e-94  Acidovorax ebreus TPSY  Bacteria  normal  0.162676  n/a   
 
 
-
 
NC_007951  Bxe_A1390  putative acyl-CoA dehydrogenase  46.12 
 
 
416 aa  344  2e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.342556 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  46.32 
 
 
402 aa  344  2e-93  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  46.32 
 
 
402 aa  344  2e-93  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  46.08 
 
 
402 aa  343  4e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  46.42 
 
 
393 aa  342  5.999999999999999e-93  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.5 
 
 
411 aa  341  1e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  45.04 
 
 
399 aa  340  2.9999999999999998e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  48.72 
 
 
374 aa  337  1.9999999999999998e-91  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0425  acyl-CoA dehydrogenase domain-containing protein  46.06 
 
 
400 aa  336  3.9999999999999995e-91  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.735968  normal  0.979961 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  43.92 
 
 
397 aa  333  2e-90  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_010338  Caul_3392  acyl-CoA dehydrogenase domain-containing protein  43.46 
 
 
403 aa  333  4e-90  Caulobacter sp. K31  Bacteria  normal  normal  0.160573 
 
 
-
 
NC_009074  BURPS668_0451  acyl-CoA dehydrogenase domain-containing protein  45.61 
 
 
402 aa  333  4e-90  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1383  acyl-CoA dehydrogenase domain-containing protein  45.61 
 
 
402 aa  333  4e-90  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0209  acyl-CoA dehydrogenase domain-containing protein  45.61 
 
 
402 aa  333  4e-90  Burkholderia mallei SAVP1  Bacteria  normal  0.150143  n/a   
 
 
-
 
NC_009076  BURPS1106A_0471  acyl-CoA dehydrogenase domain-containing protein  45.61 
 
 
402 aa  333  4e-90  Burkholderia pseudomallei 1106a  Bacteria  normal  0.367383  n/a   
 
 
-
 
NC_009080  BMA10247_2810  acyl-CoA dehydrogenase domain-containing protein  45.61 
 
 
402 aa  333  4e-90  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0635  acyl-CoA dehydrogenase domain-containing protein  45.61 
 
 
402 aa  332  5e-90  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0394  acyl-CoA dehydrogenase domain-containing protein  46.23 
 
 
403 aa  332  8e-90  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6220  Acyl-CoA dehydrogenase  45.59 
 
 
402 aa  331  2e-89  Burkholderia sp. 383  Bacteria  decreased coverage  0.0082466  normal 
 
 
-
 
NC_009077  Mjls_1724  acyl-CoA dehydrogenase domain-containing protein  43.03 
 
 
410 aa  330  2e-89  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2593  acyl-CoA dehydrogenase-like  43.65 
 
 
402 aa  330  3e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  43.31 
 
 
412 aa  330  4e-89  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  40.98 
 
 
411 aa  329  6e-89  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  42.64 
 
 
396 aa  328  8e-89  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1743  acyl-CoA dehydrogenase-like protein  42.79 
 
 
410 aa  328  9e-89  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1790  acyl-CoA dehydrogenase domain-containing protein  42.79 
 
 
410 aa  328  9e-89  Mycobacterium sp. KMS  Bacteria  normal  0.340582  normal 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  45.66 
 
 
386 aa  328  1.0000000000000001e-88  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_009338  Mflv_4379  acyl-CoA dehydrogenase domain-containing protein  43.17 
 
 
410 aa  327  2.0000000000000001e-88  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.770701  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  43.36 
 
 
398 aa  326  4.0000000000000003e-88  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2048  acyl-CoA dehydrogenase domain-containing protein  43.87 
 
 
404 aa  326  5e-88  Caulobacter sp. K31  Bacteria  normal  0.200153  normal 
 
 
-
 
NC_008726  Mvan_1965  acyl-CoA dehydrogenase domain-containing protein  43.17 
 
 
410 aa  326  5e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.180628  normal 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  44.31 
 
 
398 aa  325  7e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  42.14 
 
 
396 aa  324  1e-87  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  43.83 
 
 
398 aa  325  1e-87  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  41.87 
 
 
398 aa  324  1e-87  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  43.36 
 
 
398 aa  324  2e-87  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  43.36 
 
 
398 aa  324  2e-87  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  43.36 
 
 
398 aa  324  2e-87  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  43.36 
 
 
398 aa  324  2e-87  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  43.36 
 
 
398 aa  324  2e-87  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  43.11 
 
 
398 aa  323  3e-87  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1806  acyl-CoA dehydrogenase domain protein  41.93 
 
 
410 aa  323  4e-87  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.445924  n/a   
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  42.14 
 
 
396 aa  322  6e-87  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  45 
 
 
397 aa  322  7e-87  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  42.61 
 
 
398 aa  320  1.9999999999999998e-86  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007347  Reut_A0978  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  44.12 
 
 
400 aa  320  3e-86  Ralstonia eutropha JMP134  Bacteria  normal  0.915118  n/a   
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  42.54 
 
 
398 aa  320  3e-86  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  42.61 
 
 
398 aa  320  3e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6856  acyl-CoA dehydrogenase domain-containing protein  44.94 
 
 
402 aa  320  3.9999999999999996e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  42.36 
 
 
398 aa  319  5e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  42.36 
 
 
398 aa  319  5e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  44.06 
 
 
398 aa  319  6e-86  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  44.31 
 
 
398 aa  319  7e-86  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  41.65 
 
 
396 aa  318  1e-85  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  43.87 
 
 
400 aa  318  1e-85  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  44.06 
 
 
398 aa  318  1e-85  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0105  acyl-CoA dehydrogenase-like  42.96 
 
 
396 aa  317  2e-85  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2702  acyl-CoA dehydrogenase domain protein  43.38 
 
 
402 aa  317  3e-85  Haliangium ochraceum DSM 14365  Bacteria  normal  0.428781  normal  0.37064 
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  43.38 
 
 
393 aa  316  5e-85  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3535  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  41 
 
 
397 aa  315  7e-85  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1060  acyl-CoA dehydrogenase domain-containing protein  44.61 
 
 
398 aa  315  9.999999999999999e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  42.96 
 
 
398 aa  313  2.9999999999999996e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  40.75 
 
 
399 aa  311  1e-83  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  40.94 
 
 
402 aa  311  1e-83  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3803  putative acyl-CoA dehydrogenase-like protein  41.75 
 
 
397 aa  310  2e-83  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  41.38 
 
 
393 aa  310  2.9999999999999997e-83  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  42.16 
 
 
401 aa  309  4e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  41.83 
 
 
398 aa  310  4e-83  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3873  acyl-CoA dehydrogenase domain-containing protein  42.93 
 
 
406 aa  309  5e-83  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2104  acyl-CoA dehydrogenase domain-containing protein  43.39 
 
 
393 aa  308  9e-83  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3835  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  44.09 
 
 
401 aa  306  4.0000000000000004e-82  Ralstonia eutropha JMP134  Bacteria  normal  0.520292  n/a   
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  40.64 
 
 
403 aa  305  8.000000000000001e-82  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  42.96 
 
 
399 aa  305  1.0000000000000001e-81  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6832  acyl-CoA dehydrogenase domain-containing protein  42.93 
 
 
403 aa  305  1.0000000000000001e-81  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.111303  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  41.65 
 
 
393 aa  304  2.0000000000000002e-81  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_013441  Gbro_3358  acyl-CoA dehydrogenase domain protein  40.34 
 
 
410 aa  303  3.0000000000000004e-81  Gordonia bronchialis DSM 43247  Bacteria  normal  0.72222  n/a   
 
 
-
 
NC_007794  Saro_1568  acyl-CoA dehydrogenase-like  40.4 
 
 
395 aa  303  5.000000000000001e-81  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.164987  n/a   
 
 
-
 
NC_007348  Reut_B3857  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  43.28 
 
 
399 aa  302  7.000000000000001e-81  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  41.4 
 
 
393 aa  301  1e-80  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  41.44 
 
 
393 aa  301  2e-80  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
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