| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0845 |
|---|
| Symbol | |
|---|
| ID | 4037636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 925373 |
|---|
| End bp | 926569 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637976221 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_583000 |
|---|
| Protein GI | 94309790 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.444844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGC TGTTGACACC CGAACTTGTC GAGTTTCGGG ACACCGTACG CGCTTTCCTG
CGCGAGCATC TGCCTGCGGA ACTGCGTCGG GGGCAGCAAC TCACGACGGC GATGTATCCG
GAGCCGGAAA TCTCGGGCCC GTGGCAGGCA CGTCTGCGTG AGCGTGGATG GCTCGTCCCA
CTGTGGCCCA GGGAGTGGGG CGGCACGGGA TGGAGCAGTA TCGAACGATT CATCTTCGAA
ACGGAATGCG CACTCGCTGG CGCGCCGCTT GTCCATCCGA TGGGGGTGAG GCTGGTCGGG
CCGGTGATAC TGCGATACGG CACCGAGGCG CAAAAGCAGA CATATCTGTC GCGCATCCTT
TCCGGGCAGG ACTACTGGTG CCAGGGATTC TCGGAGCCCG GCGCCGGTTC TGATCTGGCA
TCGCTGCGAA CCCGTGCCGT ACGCGATGGT GACCACTACG TCATCAACGG CAGCAAGTTG
TGGACGACCC ACGCCCACCA CGCGAATCGC ATGTTCGCAC TCGTGCGCAC CAGCACCGAA
GGGCGGCGGC AGGAGGGCAT CAGCTTCATT CTTATCGACA TGGAAACGCC CGGGATCTCG
GTTCGCCCGA TTCCAACCAT AGGTGGCGAC CATGACGTCA ACGAAGTGTT CTTCGACAAC
GTGCGCGTGC CCGTCGCCAA CCGCATCGGC GCGGAGAACG AAGGCTGGCA GTGCGCGCGC
TATCTGCTGG AGTTCGAGCG CGGGGCCGGC ATCTTCAGTC CTCGCCTGCG CTCGCAACTC
AAGCGGATCG GCGACGTGCT GGCGAGAGAG GCACAGTGTG ATGGCGATAC CACTGTCACT
GCCTTGCGGC GGCTCCGGTT CGGAGAGGTG CGCGCCGATC TCGACGCCTT CGAGATGCTC
GAATTGAAGA CGATGTGTTC GGTGGCGCCG GGTGAGAGCC CCGGTCCGGT GGCGTCGGTC
CTGAAGCTCC GCGCCAGCAG GCTGCGGCAG GCAATCAGCG AAATGGGGAC GACGGTTGTT
GGCGCCGAGA GCTTGCGATG GCGCGCGGAC GACGCCCACG ATGAGGAGCC TTCCGAAGAC
GAGGTGTTGC GCGCGTGTTT GCTGCCTGAC TTCCTCAATG CGCGGGCCTA CACGATCTTC
GGCGGTGCGG CCGAGGTCCA GTTGGGCATT ATCGCGAAGT CCTGCCTGGG GGCCTGA
|
|---|
| Protein sequence | MDLLLTPELV EFRDTVRAFL REHLPAELRR GQQLTTAMYP EPEISGPWQA RLRERGWLVP
LWPREWGGTG WSSIERFIFE TECALAGAPL VHPMGVRLVG PVILRYGTEA QKQTYLSRIL
SGQDYWCQGF SEPGAGSDLA SLRTRAVRDG DHYVINGSKL WTTHAHHANR MFALVRTSTE
GRRQEGISFI LIDMETPGIS VRPIPTIGGD HDVNEVFFDN VRVPVANRIG AENEGWQCAR
YLLEFERGAG IFSPRLRSQL KRIGDVLARE AQCDGDTTVT ALRRLRFGEV RADLDAFEML
ELKTMCSVAP GESPGPVASV LKLRASRLRQ AISEMGTTVV GAESLRWRAD DAHDEEPSED
EVLRACLLPD FLNARAYTIF GGAAEVQLGI IAKSCLGA
|
|---|
| |