Gene Saro_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1568 
Symbol 
ID3917243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1625751 
End bp1626938 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID640444308 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_496842 
Protein GI87199585 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.164987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTTG AACTCGATCC CGCCGATGTC GCCTTTCGCG AGGAAGTGCG CGAATTCTTC 
ACCACCGGCA TCCCCCAGGA GTGGCGCACC CGCGTCCGTG CAGGATTGCG CCTCCATCCC
GAAGAGCTGA TCGCATACCA GAAGCGCCTC GCCGCAAAGG GCTGGGGCGC GCCCACGTGG
CCTGCCCAGT ACGGTGGCAC CGGCTGGAGC CCGATCCGTC AGTACATCTT CTGGACCGAG
GCTGCCGAGG CCGATGCCCC CGCCCAGTTC CACCAAGGGC TCGAGCTGAT CGGCCCGATC
ATCTTCACGT ACGGCAGCGC CGCCCAGAAG GCGCGCTTTC TGCCGGGCAT CGTCAATGCC
GACGACTGGT GGTGCCAGGG CTATTCCGAA CCCAACGCCG GATCGGATCT TGCATCGCTC
CGCACCCGCG CGGTGCGCGA TGGCGACCAC TACGTGCTCA ACGGGCAGAA GGCGTGGACC
AGCTACGGGC ACGTCGCCAG CCACTGCTTC GTGCTGGCCC GGACTTCTGA CGAGGCCAAG
CGGCAGCAGG GCATCTCGCT GTTCCTGCTC GACATGAAGA CGCCGGGCAT CACCATCCGC
CCGGTCGCGA CTATGGACGA GAAGCACCAC ACCAACGAGA TGTTCCTCGA TGACGTTCGC
GTACCGGTCG AAAACCTGGT TGGGGAAGAA GGGCGCGGCT GGGAATACGG CAAGGTCCTG
CTCGACCGCG AACGCATGGT CACTGCATCG GTGGCGGTCT TCCTGATCCA GACGGTCAAG
GCGATCCGAG ATGCGGCCTC TCGGCACACG ATCGGGGGCG TGTCGCTGCT CGACAAGCCG
GACTTCAAGG ACAAGCTGGC GCAGTACGAG ATCGAGGTGA TCGCGCTCCA GACGATGGTC
CTTCGCGTAA TGGCGGATGC CAGCGCAGGG GTTGATTCGG GACCGCTCGG GTCGATGATC
AAGCTTCGCT GGTCGCAGCT CCTGCAGGCC GGCACCGCTC TGTGGATCGC CGCTCTCGGG
CCAAAGGCCG CCCACTTTGC CGCGCTCGAC CACGCTTCGG TCCTGCCCAC CGACATGCCC
TATGCCATGC AGGGCGTGCT CCATTCCCGC GTGACCTCGA TCTATGGCGG ATCGAGCGAG
ATCCAGCACA ACATCATCGC CCAGCGTGCG CTGGGCCTGA AGGGATAA
 
Protein sequence
MDFELDPADV AFREEVREFF TTGIPQEWRT RVRAGLRLHP EELIAYQKRL AAKGWGAPTW 
PAQYGGTGWS PIRQYIFWTE AAEADAPAQF HQGLELIGPI IFTYGSAAQK ARFLPGIVNA
DDWWCQGYSE PNAGSDLASL RTRAVRDGDH YVLNGQKAWT SYGHVASHCF VLARTSDEAK
RQQGISLFLL DMKTPGITIR PVATMDEKHH TNEMFLDDVR VPVENLVGEE GRGWEYGKVL
LDRERMVTAS VAVFLIQTVK AIRDAASRHT IGGVSLLDKP DFKDKLAQYE IEVIALQTMV
LRVMADASAG VDSGPLGSMI KLRWSQLLQA GTALWIAALG PKAAHFAALD HASVLPTDMP
YAMQGVLHSR VTSIYGGSSE IQHNIIAQRA LGLKG