| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3726 |
|---|
| Symbol | |
|---|
| ID | 4598588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | + |
|---|
| Start bp | 3951715 |
|---|
| End bp | 3952866 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639778334 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_924913 |
|---|
| Protein GI | 119717948 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.018504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTGG CGCTGTCCGC GGAGGACGCC GAGTTCCGCG ACGAGATGCG GGAGTTCTTC
ACCACGAAGG TCCCCCAGGA GATCCGCGAC GCGGTCCGCG ACCAGCGTGA GCTGACCAAG
GACCAGTTCG TCACCAGCAT GCGGATCCTC AACGAGCACG GGCTCGCCGT ACCGAACTGG
CCCGTCGAGT GGGGTGGCCG AGACTGGTCG GCGCTGCGGC GCCACATCTG GCACGAGGAG
ATGCAGCGGG CCTTCGTGCC GGCGCCGCTG GCGTTCAACG CGACGATGAT CGGGCCGGTG
ATCGCCCAGT TCGGCTCCCA GGAGCTCAAG GAGCGGTTCC TCCCCGCGAC CGCGAACCTG
GACATCTGGT GGTCGCAGGG GTTCTCCGAG CCCGACGCCG GCTCCGACCT CGCTTCGCTG
CGCACCACCG CGGTGCGGGA CGGCGACGAG TACGTCGTCA ACGGGCAGAA GACGTGGACC
ACGCTCGGCC AGTACGGCGA CTGGATCTTC AACCTCGTGC GCACCGACCC GGAGGCCAAG
AAGCAGGCCG GCATCTCGAT GCTGCTCATC GACATGACCT CCCCCGGCGT CGAGGTGCGC
CCGATCGAGC TGATCGACGG TGGCCACGAG GTCAACGAGG TGTGGTTCTC CGACGTGCGG
GTGCCGGTCG AGAACCTGGT CGGCGAGGAG AATCGCGCGT GGGACTACGC GAAGTTCCTG
CTCGGCAACG AGCGCGTGGG CGTCGCGCCG GTCGGCGCCA CCAAGCGGCT GCTGGCCCAG
GCCAAGCAGT GGGCCGGGCC GCTGCTCGAC GACCCCCTGG TCGCCGCCCG GATCGCCGAG
CTCGAGAACG AGCTGCTGGC CCTGGAGCTC ACCGCGCTGC GCGTGGTCGC CCACTCCGCC
GACGGCAAGC CACACCCGGC GTCCTCGGTG CTCAAGCTCA AGGGCACCGA GCTGCAGCAG
GCGGTGACCG AGCTGGTCGT CGACCTCGCC GGGCCGGCGT CGCTGGCGAG TGGCGCCGGC
GACGACTCCG ACCTGCCCTG GTGGACGCGG CGCTCGACGC CGATCTACCT CAACTTCCGC
AAGGCCTCGA TCTACGGCGG CTCCAACGAG GTGCAGCGCC AGATCATCGC CCGCACGATC
CTCGGGCTCT GA
|
|---|
| Protein sequence | MQLALSAEDA EFRDEMREFF TTKVPQEIRD AVRDQRELTK DQFVTSMRIL NEHGLAVPNW
PVEWGGRDWS ALRRHIWHEE MQRAFVPAPL AFNATMIGPV IAQFGSQELK ERFLPATANL
DIWWSQGFSE PDAGSDLASL RTTAVRDGDE YVVNGQKTWT TLGQYGDWIF NLVRTDPEAK
KQAGISMLLI DMTSPGVEVR PIELIDGGHE VNEVWFSDVR VPVENLVGEE NRAWDYAKFL
LGNERVGVAP VGATKRLLAQ AKQWAGPLLD DPLVAARIAE LENELLALEL TALRVVAHSA
DGKPHPASSV LKLKGTELQQ AVTELVVDLA GPASLASGAG DDSDLPWWTR RSTPIYLNFR
KASIYGGSNE VQRQIIARTI LGL
|
|---|
| |