More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5357 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5357  putative acyl-CoA dehydrogenase  100 
 
 
383 aa  779    Cupriavidus metallidurans CH34  Bacteria  normal  0.0369214  normal 
 
 
-
 
NC_009719  Plav_0924  acyl-CoA dehydrogenase domain-containing protein  62.02 
 
 
383 aa  461  9.999999999999999e-129  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0605  putative acyl-CoA dehydrogenase  60.11 
 
 
382 aa  423  1e-117  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00592793  normal  0.0752366 
 
 
-
 
NC_011992  Dtpsy_0079  acyl-CoA dehydrogenase domain protein  54.42 
 
 
380 aa  400  9.999999999999999e-111  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1895  acyl-CoA dehydrogenase domain-containing protein  56.03 
 
 
383 aa  385  1e-106  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0088  acyl-CoA dehydrogenase domain-containing protein  53.68 
 
 
385 aa  383  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  0.745656  normal 
 
 
-
 
NC_013757  Gobs_3810  acyl-CoA dehydrogenase domain protein  54.2 
 
 
386 aa  382  1e-105  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.492901  n/a   
 
 
-
 
NC_008782  Ajs_0061  acyl-CoA dehydrogenase domain-containing protein  50.13 
 
 
385 aa  380  1e-104  Acidovorax sp. JS42  Bacteria  normal  0.957206  normal 
 
 
-
 
NC_007348  Reut_B3557  Acyl-CoA dehydrogenase, central region  53.26 
 
 
386 aa  379  1e-104  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2737  putative acyl-CoA dehydrogenase  52.52 
 
 
385 aa  375  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0207  putative acyl-CoA dehydrogenase  52.22 
 
 
387 aa  377  1e-103  Burkholderia xenovorans LB400  Bacteria  normal  0.698342  normal  0.648676 
 
 
-
 
NC_007974  Rmet_5144  putative acyl-CoA dehydrogenase  51.91 
 
 
385 aa  377  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.16071 
 
 
-
 
NC_007336  Reut_C6298  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.1 
 
 
379 aa  373  1e-102  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  50.41 
 
 
387 aa  367  1e-100  Ralstonia eutropha JMP134  Bacteria  normal  0.131003  n/a   
 
 
-
 
NC_007509  Bcep18194_C7127  Acyl-CoA dehydrogenase  51.07 
 
 
385 aa  367  1e-100  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4074  acyl-CoA dehydrogenase-like protein  52.14 
 
 
386 aa  363  2e-99  Cupriavidus metallidurans CH34  Bacteria  normal  0.0382192  normal 
 
 
-
 
NC_008254  Meso_3278  acyl-CoA dehydrogenase-like  50 
 
 
383 aa  363  4e-99  Chelativorans sp. BNC1  Bacteria  normal  0.827107  n/a   
 
 
-
 
NC_009511  Swit_3274  acyl-CoA dehydrogenase domain-containing protein  51.21 
 
 
399 aa  360  2e-98  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.220833 
 
 
-
 
NC_010505  Mrad2831_3260  acyl-CoA dehydrogenase domain-containing protein  52.32 
 
 
383 aa  357  1.9999999999999998e-97  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4040  acyl-CoA dehydrogenase domain-containing protein  49.61 
 
 
410 aa  357  1.9999999999999998e-97  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.572322  normal 
 
 
-
 
NC_009427  Saro_3624  acyl-CoA dehydrogenase domain-containing protein  50.94 
 
 
381 aa  355  7.999999999999999e-97  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0271  acyl-CoA dehydrogenase-like  48.51 
 
 
386 aa  350  2e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.360882 
 
 
-
 
NC_009485  BBta_7535  putative acyl-CoA dehydrogenase  48.53 
 
 
385 aa  348  7e-95  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0482  acyl-CoA dehydrogenase domain protein  48.26 
 
 
386 aa  348  8e-95  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708423  n/a   
 
 
-
 
NC_007778  RPB_0558  Acyl-CoA dehydrogenase-like  49.32 
 
 
386 aa  348  1e-94  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.58726  normal  0.0406105 
 
 
-
 
NC_008048  Sala_1240  acyl-CoA dehydrogenase-like protein  50.93 
 
 
640 aa  342  4e-93  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.485103  normal 
 
 
-
 
NC_008726  Mvan_3917  acyl-CoA dehydrogenase domain-containing protein  50.14 
 
 
381 aa  338  8e-92  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0198331  normal 
 
 
-
 
NC_009338  Mflv_5166  Fis family transcriptional regulator  48.83 
 
 
382 aa  331  2e-89  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.170532 
 
 
-
 
NC_008726  Mvan_2876  acyl-CoA dehydrogenase domain-containing protein  47.79 
 
 
383 aa  327  1.0000000000000001e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0157602  normal 
 
 
-
 
NC_013441  Gbro_0907  acyl-CoA dehydrogenase domain protein  47.97 
 
 
374 aa  323  4e-87  Gordonia bronchialis DSM 43247  Bacteria  normal  0.731697  n/a   
 
 
-
 
NC_013757  Gobs_3772  acyl-CoA dehydrogenase domain protein  47.72 
 
 
378 aa  320  3e-86  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.717662  n/a   
 
 
-
 
NC_013510  Tcur_2499  acyl-CoA dehydrogenase domain protein  45.14 
 
 
371 aa  307  2.0000000000000002e-82  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000304997  n/a   
 
 
-
 
NC_008146  Mmcs_0213  acyl-CoA dehydrogenase-like protein  44.53 
 
 
385 aa  292  7e-78  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0223  acyl-CoA dehydrogenase domain-containing protein  44.53 
 
 
408 aa  292  7e-78  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0203  acyl-CoA dehydrogenase domain-containing protein  44.53 
 
 
385 aa  290  4e-77  Mycobacterium sp. JLS  Bacteria  normal  normal  0.672211 
 
 
-
 
NC_009077  Mjls_4154  acyl-CoA dehydrogenase domain-containing protein  44.27 
 
 
384 aa  280  2e-74  Mycobacterium sp. JLS  Bacteria  normal  0.041099  normal  0.843392 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  35.43 
 
 
452 aa  185  1.0000000000000001e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  32.26 
 
 
400 aa  182  1e-44  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  34.67 
 
 
378 aa  182  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_009511  Swit_1850  acyl-CoA dehydrogenase domain-containing protein  34.62 
 
 
396 aa  179  9e-44  Sphingomonas wittichii RW1  Bacteria  normal  0.441994  normal 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  33.59 
 
 
393 aa  176  7e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  35.33 
 
 
415 aa  175  9e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  35.21 
 
 
415 aa  175  9.999999999999999e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  35.38 
 
 
414 aa  173  3.9999999999999995e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_007348  Reut_B3835  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  33.17 
 
 
401 aa  173  5.999999999999999e-42  Ralstonia eutropha JMP134  Bacteria  normal  0.520292  n/a   
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  36.44 
 
 
415 aa  172  6.999999999999999e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_010676  Bphyt_5104  acyl-CoA dehydrogenase domain protein  34.91 
 
 
399 aa  171  3e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0845  acyl-CoA dehydrogenase-like protein  34.71 
 
 
398 aa  170  4e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.444844 
 
 
-
 
NC_007974  Rmet_5530  acyl-CoA dehydrogenase  32.12 
 
 
386 aa  170  4e-41  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6851  acyl-CoA dehydrogenase domain-containing protein  34.52 
 
 
399 aa  169  7e-41  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  33.16 
 
 
380 aa  169  7e-41  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  35.6 
 
 
374 aa  169  9e-41  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6850  acyl-CoA dehydrogenase domain-containing protein  39.15 
 
 
378 aa  168  1e-40  Frankia sp. EAN1pec  Bacteria  normal  0.290885  normal 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  32.34 
 
 
396 aa  169  1e-40  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_007974  Rmet_3727  putative acyl-CoA dehydrogenase  33.08 
 
 
399 aa  169  1e-40  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  32.09 
 
 
396 aa  168  2e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  34.26 
 
 
413 aa  167  2e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  34.6 
 
 
415 aa  167  2e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  32.59 
 
 
396 aa  167  4e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  31.84 
 
 
396 aa  166  5.9999999999999996e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  34.12 
 
 
414 aa  166  8e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  33.73 
 
 
414 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  31.11 
 
 
363 aa  164  3e-39  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  31.81 
 
 
398 aa  164  3e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1993  acyl-CoA dehydrogenase domain-containing protein  34.34 
 
 
395 aa  163  4.0000000000000004e-39  Sphingomonas wittichii RW1  Bacteria  normal  0.0322814  normal 
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
419 aa  163  5.0000000000000005e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  31.15 
 
 
383 aa  163  5.0000000000000005e-39  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4783  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
385 aa  162  6e-39  Mycobacterium sp. JLS  Bacteria  normal  0.7953  normal  0.758289 
 
 
-
 
NC_009511  Swit_0317  acyl-CoA dehydrogenase domain-containing protein  33.16 
 
 
386 aa  163  6e-39  Sphingomonas wittichii RW1  Bacteria  normal  0.410084  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  31.47 
 
 
398 aa  162  7e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13606  acyl-CoA dehydrogenase fadE34  32.88 
 
 
711 aa  162  8.000000000000001e-39  Mycobacterium tuberculosis F11  Bacteria  normal  0.65257  normal  0.531914 
 
 
-
 
NC_007348  Reut_B3603  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  32.24 
 
 
411 aa  162  1e-38  Ralstonia eutropha JMP134  Bacteria  normal  0.0376418  n/a   
 
 
-
 
NC_007517  Gmet_2199  Acyl-CoA dehydrogenase-like  30.89 
 
 
388 aa  162  1e-38  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000000079384  hitchhiker  0.00524222 
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  33.72 
 
 
415 aa  161  1e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_009921  Franean1_4294  acyl-CoA dehydrogenase domain-containing protein  32.6 
 
 
368 aa  162  1e-38  Frankia sp. EAN1pec  Bacteria  normal  0.83932  normal  0.79155 
 
 
-
 
NC_007333  Tfu_1468  Acyl-CoA dehydrogenase  34.72 
 
 
716 aa  161  2e-38  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  33.16 
 
 
374 aa  161  2e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  40.43 
 
 
383 aa  161  2e-38  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  31.57 
 
 
400 aa  161  2e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  31.08 
 
 
398 aa  160  3e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  32.66 
 
 
398 aa  160  3e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  31.33 
 
 
393 aa  160  3e-38  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_008146  Mmcs_4402  acyl-CoA dehydrogenase-like protein  36.92 
 
 
385 aa  160  4e-38  Mycobacterium sp. MCS  Bacteria  normal  0.324199  n/a   
 
 
-
 
NC_008463  PA14_51100  acyl-CoA dehydrogenase  34.49 
 
 
381 aa  160  4e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.28895  decreased coverage  0.000000076859 
 
 
-
 
NC_008705  Mkms_4489  acyl-CoA dehydrogenase domain-containing protein  36.92 
 
 
385 aa  160  4e-38  Mycobacterium sp. KMS  Bacteria  normal  0.253194  normal 
 
 
-
 
NC_009921  Franean1_6924  acyl-CoA dehydrogenase domain-containing protein  32.32 
 
 
365 aa  160  5e-38  Frankia sp. EAN1pec  Bacteria  normal  normal  0.386717 
 
 
-
 
NC_009656  PSPA7_4361  acyl-CoA dehydrogenase  34.4 
 
 
381 aa  159  5e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  33.62 
 
 
398 aa  159  6e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_009720  Xaut_1702  acyl-CoA dehydrogenase domain-containing protein  32.95 
 
 
396 aa  159  6e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  0.176609  hitchhiker  0.00005108 
 
 
-
 
NC_009338  Mflv_1792  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
399 aa  159  8e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.719209 
 
 
-
 
NC_010622  Bphy_1992  acyl-CoA dehydrogenase domain-containing protein  32.74 
 
 
398 aa  159  9e-38  Burkholderia phymatum STM815  Bacteria  normal  0.11361  normal  0.377898 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  31.76 
 
 
393 aa  159  9e-38  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  33.74 
 
 
398 aa  159  9e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_007348  Reut_B3857  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  32.91 
 
 
399 aa  158  1e-37  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  29.6 
 
 
411 aa  158  1e-37  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  33.5 
 
 
398 aa  158  1e-37  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  31.51 
 
 
396 aa  158  1e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  33.07 
 
 
386 aa  159  1e-37  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_012791  Vapar_0842  acyl-CoA dehydrogenase domain protein  31.65 
 
 
402 aa  158  1e-37  Variovorax paradoxus S110  Bacteria  normal  0.0566206  n/a   
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  30.89 
 
 
370 aa  157  2e-37  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
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