Gene Strop_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2615 
Symbol 
ID5059078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2936244 
End bp2937404 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content71% 
IMG OID640474871 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001159437 
Protein GI145595140 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.766837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACG ATGAGTTCCG GCAGGCGGTG CGCGCCTGGT TGACGGAGAA TGTCGGCGCC 
GAGCTGCGGG GCGCGGGCGG ACCGGGCCGG GAGCACGAGG CATACCGTGA ACGGCTGGCG
TTCAACCGCC GGCTGGCCGC CGCGGGCTGG ACCTGTCTTG GCTGGCCGGT CGAGCACGGC
GGTCGTGGCG CGACGCTTGC CCAACAGGTC GCCTTCCACG AGGAGTACGC CCGTGCCGGC
GCTCCGGCGC GCGTCGGCTA CCTGGGTGAG GAGCTACTCG GCCCGACGTT GATCGCCTAC
GGCACGCCGG CGCAACGCCG GCGTTTCCTG CCCGGGATTC GAGCTGTCGA ACAGCTGTGG
TGCCAGGGAT ACTCCGAGCC GGGGGCAGGG TCTGATCTCG CCGCCGTGGC GACCCGAGCC
CGACTGGTCG GTGACGAGTG GGTGATCGAT GGGCAGAAGG TGTGGACCTC ACTGGCGCAC
GTGGCGCACT GGTGCTTCCT TCTGGCCCGC ACCGAGTCCG CCGGCACCGG GCCGCGCCAC
TCGGGGCTTT CCTATCTGCT CGTGCCCATG CGGCAACCCG GCATCACGGT GCGGCCCATC
CGTCAGCTGA CCGGTACATC GGAGTTCAAC GAGGTCTTCT TCGACGGCGC ACGTACCTCG
CGGGACATGG TTGTCGGTGA GGTCGGCCAG GGGTGGCGGG TGGCGATGGG CACCCTCGCG
TTCGAGCGAG GCGCGGCGAC GCTCGGCCAA CAGGTCGGGT TCCAGCGGGA GCTGGACCGG
CTGGTGGCGC TCGCCCGGCA AACCGGCGTC GCCGGTGAGC CACAGCTGCG CGACCTGCTG
GCCCGCGCCG CTGTCGGGCT CTGGGCGCTG CGCGCGCACA CCCTACGGAC GATGGCCGAG
GCTGACCAGG CCGGGCCAGG GCAGGGAGCG TCCGCGGTGA AGCTGCTCTG GTCGCGGTGG
CATCAGCAAC TCGGCGAGGT GGCGATGCGG GTGCGCGGCG CCTCCGGAAC GGTTGCCCGG
GACGCCCCCT ACGAACTGGA CGACTGGCAG CGACTCTTTC TGTTCGCCCG AGCGGACACG
ATCTACGGCG GGTCGGACGA GATCCAGCGG GGCATCATCG CCGAACGGGT TCTCGGCCTG
CCACGACAGG CCCGCGGATG A
 
Protein sequence
MHDDEFRQAV RAWLTENVGA ELRGAGGPGR EHEAYRERLA FNRRLAAAGW TCLGWPVEHG 
GRGATLAQQV AFHEEYARAG APARVGYLGE ELLGPTLIAY GTPAQRRRFL PGIRAVEQLW
CQGYSEPGAG SDLAAVATRA RLVGDEWVID GQKVWTSLAH VAHWCFLLAR TESAGTGPRH
SGLSYLLVPM RQPGITVRPI RQLTGTSEFN EVFFDGARTS RDMVVGEVGQ GWRVAMGTLA
FERGAATLGQ QVGFQRELDR LVALARQTGV AGEPQLRDLL ARAAVGLWAL RAHTLRTMAE
ADQAGPGQGA SAVKLLWSRW HQQLGEVAMR VRGASGTVAR DAPYELDDWQ RLFLFARADT
IYGGSDEIQR GIIAERVLGL PRQARG