Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2615 |
Symbol | |
ID | 5059078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2936244 |
End bp | 2937404 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474871 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001159437 |
Protein GI | 145595140 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.766837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGACG ATGAGTTCCG GCAGGCGGTG CGCGCCTGGT TGACGGAGAA TGTCGGCGCC GAGCTGCGGG GCGCGGGCGG ACCGGGCCGG GAGCACGAGG CATACCGTGA ACGGCTGGCG TTCAACCGCC GGCTGGCCGC CGCGGGCTGG ACCTGTCTTG GCTGGCCGGT CGAGCACGGC GGTCGTGGCG CGACGCTTGC CCAACAGGTC GCCTTCCACG AGGAGTACGC CCGTGCCGGC GCTCCGGCGC GCGTCGGCTA CCTGGGTGAG GAGCTACTCG GCCCGACGTT GATCGCCTAC GGCACGCCGG CGCAACGCCG GCGTTTCCTG CCCGGGATTC GAGCTGTCGA ACAGCTGTGG TGCCAGGGAT ACTCCGAGCC GGGGGCAGGG TCTGATCTCG CCGCCGTGGC GACCCGAGCC CGACTGGTCG GTGACGAGTG GGTGATCGAT GGGCAGAAGG TGTGGACCTC ACTGGCGCAC GTGGCGCACT GGTGCTTCCT TCTGGCCCGC ACCGAGTCCG CCGGCACCGG GCCGCGCCAC TCGGGGCTTT CCTATCTGCT CGTGCCCATG CGGCAACCCG GCATCACGGT GCGGCCCATC CGTCAGCTGA CCGGTACATC GGAGTTCAAC GAGGTCTTCT TCGACGGCGC ACGTACCTCG CGGGACATGG TTGTCGGTGA GGTCGGCCAG GGGTGGCGGG TGGCGATGGG CACCCTCGCG TTCGAGCGAG GCGCGGCGAC GCTCGGCCAA CAGGTCGGGT TCCAGCGGGA GCTGGACCGG CTGGTGGCGC TCGCCCGGCA AACCGGCGTC GCCGGTGAGC CACAGCTGCG CGACCTGCTG GCCCGCGCCG CTGTCGGGCT CTGGGCGCTG CGCGCGCACA CCCTACGGAC GATGGCCGAG GCTGACCAGG CCGGGCCAGG GCAGGGAGCG TCCGCGGTGA AGCTGCTCTG GTCGCGGTGG CATCAGCAAC TCGGCGAGGT GGCGATGCGG GTGCGCGGCG CCTCCGGAAC GGTTGCCCGG GACGCCCCCT ACGAACTGGA CGACTGGCAG CGACTCTTTC TGTTCGCCCG AGCGGACACG ATCTACGGCG GGTCGGACGA GATCCAGCGG GGCATCATCG CCGAACGGGT TCTCGGCCTG CCACGACAGG CCCGCGGATG A
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Protein sequence | MHDDEFRQAV RAWLTENVGA ELRGAGGPGR EHEAYRERLA FNRRLAAAGW TCLGWPVEHG GRGATLAQQV AFHEEYARAG APARVGYLGE ELLGPTLIAY GTPAQRRRFL PGIRAVEQLW CQGYSEPGAG SDLAAVATRA RLVGDEWVID GQKVWTSLAH VAHWCFLLAR TESAGTGPRH SGLSYLLVPM RQPGITVRPI RQLTGTSEFN EVFFDGARTS RDMVVGEVGQ GWRVAMGTLA FERGAATLGQ QVGFQRELDR LVALARQTGV AGEPQLRDLL ARAAVGLWAL RAHTLRTMAE ADQAGPGQGA SAVKLLWSRW HQQLGEVAMR VRGASGTVAR DAPYELDDWQ RLFLFARADT IYGGSDEIQR GIIAERVLGL PRQARG
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