Gene Ajs_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0061 
Symbol 
ID4671899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp66104 
End bp67261 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content69% 
IMG OID639837193 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_984392 
Protein GI121592496 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.957206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTTC TGGATTCACT CGCGCTCACG CGCATTCCGC CGGAAGATGA GGCGCTGCGC 
GCCGAAGTGC GCGCCTTCCT CGCAGAGGCG GTGCGCGACC TGCCCGCGCA TGTGCGGGCA
CGTTCGTGGG GCGGCTACAG CACACAGCTG AGCCGCCGGC TGGGCGAGCG CGGTTGGATC
GGCATCACGC TGCCGCGCGA ATACGGCGGC GGCGGGCGCA GCGCGTTCGC GCGCTACGTG
CTGGTCGAGG AATACCTGAA CTGCGGCGCG CCCGTGGGCT CGCACTGGAT CGCCGACCGC
CAGAGCGCGC CGCTGATCCT GAAATACGGC ACCGAGGCGC AGAAGCAGTT TTACCTTCCG
CGCGTGTGCA AGGGCGAGGC GTTCTTCTGC ATCGGCATGA GCGAGCCGAA TTCCGGTTCC
GACCTGGCCA GCGTGAAGAC GCGCGCCGTG CCCAACGACC AGGGCTTTGT GCTCAACGGC
CAGAAGATCT GGACCACCAA CGCCCATCAC TGCCAGTACA TGATTGCGCT GGTACGCACC
TCGGGCACGG CGGAAGACCG CCACAAGGGC CTGTCGCAGG TGATCGTCGA CCTGTCGCTG
CCCGGCGTGA CCGTGCGCCC CATCGAAGAC CTCTCGGGCG ACAGCCACTT CTGCGAGGTG
TTCTTCGACA ACGTGCAGTT GGGCCCGGAT GCCCTCATCG GCGCCGAGGG CCAGGGCTGG
GAGCAGGTCA CGGCCGAACT CGCCTTCGAG CGCAGCGGCC CCGAGCGCCT GTTCTCCTCC
ATCGTGCTGT TCGACCAGTG GCTCGACTAC GTGCGCACGC CCCAGGGCCG CAGCGAATCG
GCGGTGCGCC TGGCGGGCAA GGTCCTCACG CAGCTGGCAC CGCTGCGCGC CATGTCGGTG
GCCGTGCAGG AAAAGCTGGT GCAGGGCGCC AGCCCCGTCG TGGAGGCCGC CCTGGTCAAG
GAGCTGGGCA CCACGCTGGA GCAGATGATT CCCGCCGCCA TCGCCGACGA CCTGTTTGCG
CGCGAGGCGG AAGACGTGCC TGTGGAGCTG CTGATGACGC TCAAGTACGT GACCGAGGCC
TCGCCCTCGT TCTCTTTGCG CGGCGGCACG CGCGACATCC TGCGCGGGAT GATCGCCCGG
GGCCTGGGCC TGCGCTGA
 
Protein sequence
MSVLDSLALT RIPPEDEALR AEVRAFLAEA VRDLPAHVRA RSWGGYSTQL SRRLGERGWI 
GITLPREYGG GGRSAFARYV LVEEYLNCGA PVGSHWIADR QSAPLILKYG TEAQKQFYLP
RVCKGEAFFC IGMSEPNSGS DLASVKTRAV PNDQGFVLNG QKIWTTNAHH CQYMIALVRT
SGTAEDRHKG LSQVIVDLSL PGVTVRPIED LSGDSHFCEV FFDNVQLGPD ALIGAEGQGW
EQVTAELAFE RSGPERLFSS IVLFDQWLDY VRTPQGRSES AVRLAGKVLT QLAPLRAMSV
AVQEKLVQGA SPVVEAALVK ELGTTLEQMI PAAIADDLFA REAEDVPVEL LMTLKYVTEA
SPSFSLRGGT RDILRGMIAR GLGLR