Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0061 |
Symbol | |
ID | 4671899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 66104 |
End bp | 67261 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639837193 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_984392 |
Protein GI | 121592496 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.957206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGGTTC TGGATTCACT CGCGCTCACG CGCATTCCGC CGGAAGATGA GGCGCTGCGC GCCGAAGTGC GCGCCTTCCT CGCAGAGGCG GTGCGCGACC TGCCCGCGCA TGTGCGGGCA CGTTCGTGGG GCGGCTACAG CACACAGCTG AGCCGCCGGC TGGGCGAGCG CGGTTGGATC GGCATCACGC TGCCGCGCGA ATACGGCGGC GGCGGGCGCA GCGCGTTCGC GCGCTACGTG CTGGTCGAGG AATACCTGAA CTGCGGCGCG CCCGTGGGCT CGCACTGGAT CGCCGACCGC CAGAGCGCGC CGCTGATCCT GAAATACGGC ACCGAGGCGC AGAAGCAGTT TTACCTTCCG CGCGTGTGCA AGGGCGAGGC GTTCTTCTGC ATCGGCATGA GCGAGCCGAA TTCCGGTTCC GACCTGGCCA GCGTGAAGAC GCGCGCCGTG CCCAACGACC AGGGCTTTGT GCTCAACGGC CAGAAGATCT GGACCACCAA CGCCCATCAC TGCCAGTACA TGATTGCGCT GGTACGCACC TCGGGCACGG CGGAAGACCG CCACAAGGGC CTGTCGCAGG TGATCGTCGA CCTGTCGCTG CCCGGCGTGA CCGTGCGCCC CATCGAAGAC CTCTCGGGCG ACAGCCACTT CTGCGAGGTG TTCTTCGACA ACGTGCAGTT GGGCCCGGAT GCCCTCATCG GCGCCGAGGG CCAGGGCTGG GAGCAGGTCA CGGCCGAACT CGCCTTCGAG CGCAGCGGCC CCGAGCGCCT GTTCTCCTCC ATCGTGCTGT TCGACCAGTG GCTCGACTAC GTGCGCACGC CCCAGGGCCG CAGCGAATCG GCGGTGCGCC TGGCGGGCAA GGTCCTCACG CAGCTGGCAC CGCTGCGCGC CATGTCGGTG GCCGTGCAGG AAAAGCTGGT GCAGGGCGCC AGCCCCGTCG TGGAGGCCGC CCTGGTCAAG GAGCTGGGCA CCACGCTGGA GCAGATGATT CCCGCCGCCA TCGCCGACGA CCTGTTTGCG CGCGAGGCGG AAGACGTGCC TGTGGAGCTG CTGATGACGC TCAAGTACGT GACCGAGGCC TCGCCCTCGT TCTCTTTGCG CGGCGGCACG CGCGACATCC TGCGCGGGAT GATCGCCCGG GGCCTGGGCC TGCGCTGA
|
Protein sequence | MSVLDSLALT RIPPEDEALR AEVRAFLAEA VRDLPAHVRA RSWGGYSTQL SRRLGERGWI GITLPREYGG GGRSAFARYV LVEEYLNCGA PVGSHWIADR QSAPLILKYG TEAQKQFYLP RVCKGEAFFC IGMSEPNSGS DLASVKTRAV PNDQGFVLNG QKIWTTNAHH CQYMIALVRT SGTAEDRHKG LSQVIVDLSL PGVTVRPIED LSGDSHFCEV FFDNVQLGPD ALIGAEGQGW EQVTAELAFE RSGPERLFSS IVLFDQWLDY VRTPQGRSES AVRLAGKVLT QLAPLRAMSV AVQEKLVQGA SPVVEAALVK ELGTTLEQMI PAAIADDLFA REAEDVPVEL LMTLKYVTEA SPSFSLRGGT RDILRGMIAR GLGLR
|
| |