More than 300 homologs were found in PanDaTox collection
for query gene Rpal_1910 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  80.92 
 
 
415 aa  708    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  94.2 
 
 
415 aa  805    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  77.29 
 
 
413 aa  678    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  87.68 
 
 
415 aa  753    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  94.69 
 
 
414 aa  811    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  79.71 
 
 
415 aa  707    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  100 
 
 
414 aa  851    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  78.5 
 
 
414 aa  689    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  81.64 
 
 
415 aa  713    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  62.23 
 
 
432 aa  557  1e-157  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  55.96 
 
 
407 aa  479  1e-134  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  54.74 
 
 
409 aa  464  1e-129  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  50.84 
 
 
411 aa  418  1e-116  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  48.04 
 
 
403 aa  371  1e-101  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  46.14 
 
 
407 aa  342  5e-93  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  45.43 
 
 
401 aa  328  8e-89  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  43.3 
 
 
403 aa  327  3e-88  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  47.17 
 
 
384 aa  312  6.999999999999999e-84  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  41.52 
 
 
393 aa  298  1e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  40.25 
 
 
380 aa  295  1e-78  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  42.36 
 
 
378 aa  289  7e-77  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  39.46 
 
 
393 aa  288  1e-76  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  48.58 
 
 
396 aa  285  1.0000000000000001e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5569  acyl-CoA dehydrogenase domain-containing protein  46.71 
 
 
396 aa  284  2.0000000000000002e-75  Mycobacterium sp. JLS  Bacteria  normal  0.313382  normal 
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  44.41 
 
 
395 aa  284  2.0000000000000002e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5188  acyl-CoA dehydrogenase-like protein  46.71 
 
 
396 aa  283  3.0000000000000004e-75  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5277  acyl-CoA dehydrogenase domain-containing protein  46.71 
 
 
396 aa  283  3.0000000000000004e-75  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  44.54 
 
 
390 aa  283  4.0000000000000003e-75  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_009338  Mflv_0344  acyl-CoA dehydrogenase domain-containing protein  43.25 
 
 
394 aa  281  1e-74  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0394  acyl-CoA dehydrogenase domain-containing protein  43.17 
 
 
398 aa  280  2e-74  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.254856  normal  0.326104 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  46.6 
 
 
397 aa  279  7e-74  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  38.75 
 
 
385 aa  278  2e-73  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  39.56 
 
 
400 aa  278  2e-73  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  38.48 
 
 
378 aa  273  5.000000000000001e-72  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  38.28 
 
 
381 aa  271  1e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  38.96 
 
 
390 aa  270  4e-71  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  38.41 
 
 
411 aa  266  5e-70  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5572  acyl-CoA dehydrogenase domain-containing protein  46 
 
 
398 aa  266  5.999999999999999e-70  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal 
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  39.24 
 
 
383 aa  265  1e-69  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_008699  Noca_4134  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
413 aa  265  1e-69  Nocardioides sp. JS614  Bacteria  normal  0.355452  n/a   
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  38.76 
 
 
370 aa  263  4.999999999999999e-69  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  36.68 
 
 
392 aa  258  1e-67  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  36.45 
 
 
383 aa  258  1e-67  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  41.35 
 
 
403 aa  258  1e-67  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  42.95 
 
 
396 aa  258  1e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  41.11 
 
 
395 aa  258  2e-67  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  35.4 
 
 
396 aa  256  5e-67  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  35.93 
 
 
462 aa  255  9e-67  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  36.5 
 
 
378 aa  253  6e-66  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  36.27 
 
 
396 aa  251  2e-65  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  35.1 
 
 
382 aa  249  7e-65  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  37.07 
 
 
397 aa  248  1e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  35.87 
 
 
397 aa  248  1e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
386 aa  247  3e-64  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  37.4 
 
 
363 aa  246  4.9999999999999997e-64  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_009921  Franean1_2922  acyl-CoA dehydrogenase domain-containing protein  35.47 
 
 
416 aa  246  6e-64  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  37.28 
 
 
394 aa  245  9.999999999999999e-64  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
398 aa  244  1.9999999999999999e-63  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  37.47 
 
 
382 aa  244  1.9999999999999999e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3628  acyl-CoA dehydrogenase domain-containing protein  35.41 
 
 
383 aa  244  1.9999999999999999e-63  Sphingomonas wittichii RW1  Bacteria  normal  0.373351  normal  0.221875 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  37.22 
 
 
393 aa  244  1.9999999999999999e-63  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_013441  Gbro_3995  acyl-CoA dehydrogenase domain protein  35.52 
 
 
419 aa  244  3e-63  Gordonia bronchialis DSM 43247  Bacteria  normal  0.30356  n/a   
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  34.93 
 
 
399 aa  242  1e-62  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_007511  Bcep18194_B1437  Acyl-CoA dehydrogenase  34.66 
 
 
389 aa  241  1e-62  Burkholderia sp. 383  Bacteria  normal  0.0732196  normal 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  37.08 
 
 
386 aa  242  1e-62  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  36.16 
 
 
388 aa  241  2e-62  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  34.63 
 
 
398 aa  241  2e-62  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_5078  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
384 aa  241  2e-62  Mycobacterium sp. JLS  Bacteria  normal  normal  0.292219 
 
 
-
 
NC_008146  Mmcs_4693  acyl-CoA dehydrogenase-like protein  36.67 
 
 
384 aa  241  2e-62  Mycobacterium sp. MCS  Bacteria  normal  0.311916  n/a   
 
 
-
 
NC_009921  Franean1_2719  acyl-CoA dehydrogenase domain-containing protein  33.41 
 
 
429 aa  241  2e-62  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4779  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
384 aa  241  2e-62  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  34.63 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  34.63 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  34.63 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4581  acyl-CoA dehydrogenase domain-containing protein  34.8 
 
 
394 aa  240  2.9999999999999997e-62  Frankia sp. EAN1pec  Bacteria  normal  normal  0.676846 
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  34.63 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_013159  Svir_17890  acyl-CoA dehydrogenase  38.9 
 
 
402 aa  240  2.9999999999999997e-62  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0953451  normal  0.548212 
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  34.2 
 
 
419 aa  240  2.9999999999999997e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  34.63 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3589  acyl-CoA dehydrogenase domain-containing protein  35.07 
 
 
404 aa  240  4e-62  Frankia sp. EAN1pec  Bacteria  normal  normal  0.646816 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  34.65 
 
 
392 aa  239  4e-62  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_009921  Franean1_1625  acyl-CoA dehydrogenase domain-containing protein  36.45 
 
 
422 aa  240  4e-62  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  34.22 
 
 
402 aa  240  4e-62  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  36.43 
 
 
374 aa  239  8e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_009565  TBFG_13593  acyl-CoA dehydrogenase fadE30  34.85 
 
 
385 aa  239  8e-62  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000404245  normal  0.123125 
 
 
-
 
NC_009077  Mjls_0355  acyl-CoA dehydrogenase domain-containing protein  41.89 
 
 
730 aa  239  8e-62  Mycobacterium sp. JLS  Bacteria  normal  0.353074  normal 
 
 
-
 
NC_008146  Mmcs_0366  acyl-CoA dehydrogenase-like protein  41.89 
 
 
730 aa  239  8e-62  Mycobacterium sp. MCS  Bacteria  normal  0.235849  n/a   
 
 
-
 
NC_008705  Mkms_0376  acyl-CoA dehydrogenase domain-containing protein  41.89 
 
 
730 aa  239  8e-62  Mycobacterium sp. KMS  Bacteria  normal  0.262889  normal 
 
 
-
 
NC_008726  Mvan_0403  acyl-CoA dehydrogenase domain-containing protein  38.29 
 
 
737 aa  239  8e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  35.12 
 
 
398 aa  237  3e-61  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  34.06 
 
 
398 aa  236  4e-61  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  38.4 
 
 
734 aa  236  4e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.12 
 
 
398 aa  236  5.0000000000000005e-61  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_010333  Caul_5300  acyl-CoA dehydrogenase domain-containing protein  36.23 
 
 
402 aa  236  7e-61  Caulobacter sp. K31  Bacteria  normal  normal  0.712748 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  34.15 
 
 
400 aa  235  8e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  33.82 
 
 
398 aa  235  1.0000000000000001e-60  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_009427  Saro_3756  acyl-CoA dehydrogenase domain-containing protein  34.68 
 
 
381 aa  235  1.0000000000000001e-60  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  34.24 
 
 
397 aa  235  1.0000000000000001e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_009338  Mflv_0335  acyl-CoA dehydrogenase domain-containing protein  39.94 
 
 
728 aa  235  1.0000000000000001e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  34.88 
 
 
398 aa  235  1.0000000000000001e-60  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
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