More than 300 homologs were found in PanDaTox collection
for query gene RPC_2198 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  77.29 
 
 
414 aa  678    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  84.02 
 
 
414 aa  729    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  85.51 
 
 
415 aa  741    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  78.26 
 
 
415 aa  684    Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  100 
 
 
413 aa  851    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  76.33 
 
 
414 aa  667    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  84.78 
 
 
415 aa  741    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  77.54 
 
 
415 aa  675    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  85.51 
 
 
415 aa  743    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  62.8 
 
 
432 aa  550  1e-155  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  54.5 
 
 
407 aa  455  1e-127  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  53.28 
 
 
409 aa  436  1e-121  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1032  acyl-CoA dehydrogenase domain-containing protein  49.16 
 
 
411 aa  399  9.999999999999999e-111  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.605452  normal 
 
 
-
 
NC_009511  Swit_3397  acyl-CoA dehydrogenase domain-containing protein  51.21 
 
 
403 aa  392  1e-108  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00717177  decreased coverage  0.00584794 
 
 
-
 
NC_008048  Sala_1632  acyl-CoA dehydrogenase-like protein  47.73 
 
 
407 aa  342  7e-93  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0101171  normal 
 
 
-
 
NC_013739  Cwoe_0736  acyl-CoA dehydrogenase domain protein  42.93 
 
 
403 aa  325  8.000000000000001e-88  Conexibacter woesei DSM 14684  Bacteria  normal  0.453117  normal 
 
 
-
 
NC_008048  Sala_1636  acyl-CoA dehydrogenase-like protein  44.31 
 
 
401 aa  323  2e-87  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.552524 
 
 
-
 
NC_008048  Sala_1246  acyl-CoA dehydrogenase-like protein  45.5 
 
 
384 aa  311  9e-84  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.235066  normal 
 
 
-
 
NC_009077  Mjls_5569  acyl-CoA dehydrogenase domain-containing protein  45.15 
 
 
396 aa  296  3e-79  Mycobacterium sp. JLS  Bacteria  normal  0.313382  normal 
 
 
-
 
NC_008146  Mmcs_5188  acyl-CoA dehydrogenase-like protein  44.88 
 
 
396 aa  295  1e-78  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5277  acyl-CoA dehydrogenase domain-containing protein  44.88 
 
 
396 aa  295  1e-78  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  40.1 
 
 
380 aa  294  2e-78  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_008726  Mvan_0394  acyl-CoA dehydrogenase domain-containing protein  43.96 
 
 
398 aa  291  1e-77  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.254856  normal  0.326104 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  40.4 
 
 
378 aa  286  5e-76  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_009338  Mflv_0344  acyl-CoA dehydrogenase domain-containing protein  43.61 
 
 
394 aa  285  9e-76  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7781  acyl-CoA dehydrogenase domain-containing protein  43.96 
 
 
395 aa  284  2.0000000000000002e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1475  acyl-CoA dehydrogenase domain protein  43.38 
 
 
397 aa  283  5.000000000000001e-75  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0513972  n/a   
 
 
-
 
NC_013131  Caci_1155  acyl-CoA dehydrogenase domain protein  47.63 
 
 
396 aa  281  2e-74  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2309  putative acyl-CoA dehydrogenase  43.05 
 
 
411 aa  280  3e-74  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6825  dehydrogenase family protein  39.85 
 
 
393 aa  280  4e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.178037 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  38.58 
 
 
378 aa  279  7e-74  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2698  acyl-CoA dehydrogenase domain-containing protein  43.41 
 
 
390 aa  278  2e-73  Thermobispora bispora DSM 43833  Bacteria  normal  0.96365  normal  0.79248 
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  39.46 
 
 
400 aa  274  2.0000000000000002e-72  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  39.24 
 
 
393 aa  273  4.0000000000000004e-72  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5572  acyl-CoA dehydrogenase domain-containing protein  44.78 
 
 
398 aa  271  2e-71  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal 
 
 
-
 
NC_013159  Svir_16750  acyl-CoA dehydrogenase  43.36 
 
 
403 aa  263  4e-69  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.73205  normal 
 
 
-
 
NC_014158  Tpau_1861  acyl-CoA dehydrogenase domain protein  41.64 
 
 
395 aa  259  6e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2909  acyl-CoA dehydrogenase domain-containing protein  43.83 
 
 
396 aa  259  7e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.25619  normal  0.0238889 
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  38.44 
 
 
383 aa  258  2e-67  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  38.57 
 
 
383 aa  256  6e-67  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  37.06 
 
 
390 aa  254  1.0000000000000001e-66  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
396 aa  253  6e-66  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  37.04 
 
 
385 aa  249  7e-65  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  36.55 
 
 
370 aa  248  2e-64  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  35.22 
 
 
397 aa  248  2e-64  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  36.88 
 
 
381 aa  246  4e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  38.15 
 
 
393 aa  246  6.999999999999999e-64  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  37.1 
 
 
397 aa  244  1.9999999999999999e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_008699  Noca_4134  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
413 aa  244  1.9999999999999999e-63  Nocardioides sp. JS614  Bacteria  normal  0.355452  n/a   
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  36.07 
 
 
394 aa  244  3e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0403  acyl-CoA dehydrogenase domain-containing protein  37.88 
 
 
737 aa  242  7.999999999999999e-63  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  35.78 
 
 
397 aa  242  1e-62  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  34.16 
 
 
396 aa  240  2.9999999999999997e-62  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3589  acyl-CoA dehydrogenase domain-containing protein  36.11 
 
 
404 aa  241  2.9999999999999997e-62  Frankia sp. EAN1pec  Bacteria  normal  normal  0.646816 
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  35.41 
 
 
392 aa  239  5e-62  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  35.09 
 
 
462 aa  239  8e-62  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.52 
 
 
398 aa  237  2e-61  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  37.14 
 
 
398 aa  238  2e-61  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  35.51 
 
 
399 aa  238  2e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_009565  TBFG_13595  acyl-CoA dehydrogenase fadE31  37.31 
 
 
377 aa  237  3e-61  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000120639  normal  0.258893 
 
 
-
 
NC_013510  Tcur_2177  acyl-CoA dehydrogenase domain protein  40.06 
 
 
732 aa  236  5.0000000000000005e-61  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000163847  n/a   
 
 
-
 
NC_008146  Mmcs_0366  acyl-CoA dehydrogenase-like protein  40.88 
 
 
730 aa  236  7e-61  Mycobacterium sp. MCS  Bacteria  normal  0.235849  n/a   
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
398 aa  236  7e-61  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0376  acyl-CoA dehydrogenase domain-containing protein  40.88 
 
 
730 aa  236  7e-61  Mycobacterium sp. KMS  Bacteria  normal  0.262889  normal 
 
 
-
 
NC_009077  Mjls_0355  acyl-CoA dehydrogenase domain-containing protein  40.88 
 
 
730 aa  236  7e-61  Mycobacterium sp. JLS  Bacteria  normal  0.353074  normal 
 
 
-
 
NC_009565  TBFG_10275  acyl-CoA dehydrogenase fadE6  40.53 
 
 
731 aa  235  8e-61  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0482205 
 
 
-
 
CP001800  Ssol_2123  acyl-CoA dehydrogenase domain protein  36.39 
 
 
363 aa  235  9e-61  Sulfolobus solfataricus 98/2  Archaea  unclonable  0.000012052  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  34.87 
 
 
398 aa  235  1.0000000000000001e-60  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  35.83 
 
 
419 aa  235  1.0000000000000001e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  37.34 
 
 
382 aa  234  1.0000000000000001e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0335  acyl-CoA dehydrogenase domain-containing protein  39.94 
 
 
728 aa  234  2.0000000000000002e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  35.61 
 
 
398 aa  234  2.0000000000000002e-60  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  35.04 
 
 
398 aa  234  2.0000000000000002e-60  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17890  acyl-CoA dehydrogenase  36.88 
 
 
402 aa  234  2.0000000000000002e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0953451  normal  0.548212 
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  35.04 
 
 
398 aa  234  2.0000000000000002e-60  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  35.04 
 
 
398 aa  234  2.0000000000000002e-60  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  35.61 
 
 
398 aa  234  3e-60  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  35.61 
 
 
398 aa  234  3e-60  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  34.4 
 
 
400 aa  233  3e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  35.61 
 
 
398 aa  234  3e-60  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  35.61 
 
 
398 aa  234  3e-60  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  35.61 
 
 
398 aa  234  3e-60  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  34.87 
 
 
398 aa  233  4.0000000000000004e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  35.92 
 
 
397 aa  233  5e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  40.11 
 
 
736 aa  233  5e-60  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  34.88 
 
 
400 aa  233  6e-60  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  34.79 
 
 
398 aa  233  6e-60  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2922  acyl-CoA dehydrogenase domain-containing protein  34.07 
 
 
416 aa  233  7.000000000000001e-60  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  34.08 
 
 
392 aa  232  9e-60  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_013510  Tcur_2603  acyl-CoA dehydrogenase domain protein  41.01 
 
 
719 aa  232  9e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  0.035645  n/a   
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  35.52 
 
 
374 aa  231  1e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  34.44 
 
 
382 aa  230  3e-59  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3998  acyl-CoA dehydrogenase domain protein  38.71 
 
 
734 aa  230  4e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0183743  n/a   
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  35.52 
 
 
398 aa  229  5e-59  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  36.44 
 
 
378 aa  229  5e-59  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  34.14 
 
 
402 aa  229  6e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
386 aa  228  1e-58  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_008699  Noca_2769  acyl-CoA dehydrogenase domain-containing protein  34.23 
 
 
393 aa  228  1e-58  Nocardioides sp. JS614  Bacteria  normal  0.153343  n/a   
 
 
-
 
NC_009338  Mflv_2334  acyl-CoA dehydrogenase domain-containing protein  36.8 
 
 
400 aa  227  2e-58  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.615469 
 
 
-
 
NC_010338  Caul_1447  acyl-CoA dehydrogenase domain-containing protein  37.18 
 
 
401 aa  228  2e-58  Caulobacter sp. K31  Bacteria  normal  normal  0.0993289 
 
 
-
 
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