Gene Veis_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4040 
Symbol 
ID4694285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4426073 
End bp4427305 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content68% 
IMG OID639851787 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_998763 
Protein GI121610956 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.572322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATGGG CATCGACGGA TTCATCGACC GGCGCGGCAG CAAAGACCAT CGATGACCCC 
TCCACCGGCC CCATGAACCC GCTCGACTCC CTGGGCATCA CCCCAATCCC CGCCGAGGAC
GAGGCGTTGC GCCCGCAGGT GCGCGCCTTT CTCGCGCAGG CCATCAAAGA CCTGCCGCCC
CATCGGCGCG CGCGCTCCTG GGGCGGGCAT GACGCCGCGT TCAGCCGCGC GCTGGGCCAG
CGCGGCTGGC TTGGCATCAC CTTGCCGCGC GCATATGGCG GCGCTGGCCG CAGCCCGTTT
GCGCGCTATG TGCTGGTGGA GGAATTCCTC AACTTCGGCG CGCCCGTGGG CGCGCATTGG
ATCGCCGATC GCCAAAGCGG CCCGCTGATC CTGAAGTACG GCACCGAGGC GCAAAAGCAG
TTCTACCTGC CGCGCATTTG CCGGGGCGAG GCGTTCTTTT GTATCGGCAT GAGCGAGCCT
GGCGCCGGCT CGGACCTGGC GAGCGTGAAA ACCCGTGTCC GGCCCAACGC ACAGGGTTTC
CTGCTCGATG GCCAGAAGAT CTGGACCACC AATGCCCAGC GCTGCCAGTA CATGATCGCG
CTGGTGCGCA GTTCAGGCGC GGCTGCCGAC CGGCACCAGG GGCTCTCGCA GGTCATCGTC
GACCTGGCGC TGCCCGGCGT GTCGGTGCGG CCGATCACCG ACCTTGCCGG CGATAGCCAC
TTTTGCGAAG TGTTTTTCGA TCAGGTGCAA CTGTCGCCCG AGGCGCTGAT TGGCCAGGAG
GGCCAGGGCT GGGAGCAGGT CACGGCCGAA CTGGCATTCG AGCGCAGCGG GCCTGAGCGC
CTGTTTTCCA GCATCGTGCT GTTCGACCAG TGGCTGGCCT GGGTTCGCAC CCCGCAGGGC
CGCAGCCAGA GCGCCTTGCG GCTGGCCGGC CAGGTGTTCA CACAGTTGGC GCCGCTGCGC
GCGATGTCCG TCTCGATCCA GCAGCAACTC ATGCGCGGCG CAAGTCCCGT GGTGCCGGCG
GCGCTGGTCA AGGAGCTTGG CACCACGCTG GAGCAATACA TTCCTGCCGC CATCGCCGAC
GATCTGTTCG CGCGCGACGA CACCGCCGAG GTTCCGCTCG AACTGCTGCG CACGTTGAAC
TATGTGACCG GGGTGGCGCC GTCGTTTTCC CTGCGCGGCG GCACGCGCGA CATCCTGCGC
GCAATGATTG CGCGCGGACT CGGACTGCGC TGA
 
Protein sequence
MGWASTDSST GAAAKTIDDP STGPMNPLDS LGITPIPAED EALRPQVRAF LAQAIKDLPP 
HRRARSWGGH DAAFSRALGQ RGWLGITLPR AYGGAGRSPF ARYVLVEEFL NFGAPVGAHW
IADRQSGPLI LKYGTEAQKQ FYLPRICRGE AFFCIGMSEP GAGSDLASVK TRVRPNAQGF
LLDGQKIWTT NAQRCQYMIA LVRSSGAAAD RHQGLSQVIV DLALPGVSVR PITDLAGDSH
FCEVFFDQVQ LSPEALIGQE GQGWEQVTAE LAFERSGPER LFSSIVLFDQ WLAWVRTPQG
RSQSALRLAG QVFTQLAPLR AMSVSIQQQL MRGASPVVPA ALVKELGTTL EQYIPAAIAD
DLFARDDTAE VPLELLRTLN YVTGVAPSFS LRGGTRDILR AMIARGLGLR