Gene Rpal_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0482 
Symbol 
ID6408131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp520774 
End bp521934 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content65% 
IMG OID642710394 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_001989517 
Protein GI192288912 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.708423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG CCCTCCGTTT CGATCCGATC CGCCTGCCGC CCGTCTGCGA AGAACTGCGC 
AAGGAAGTCC GCGCCTTCCT CGCCGAAGAG ATCGCCGCCG GCACCTTCGA TCCGAATAAG 
CCGCAGCGCG AAGATTCCGA CGCGCCTGAA TTCTCCCGCC GTGTCGGCGA GCGTGGCTGG 
CTCGGCATGA CCTGGCCGAA GAAATACGGC GGCCACGAGC GCACCTTCCT GGAGCGCTAC 
GTCGTCACCG AAGAGATGCG CATCGCCAAT GCGCCGACCC GCCGGTTCTT CGTCGCCGAT 
CGCCAGAGCG GCCCTGTGCT GCTGAAATAC GCGCCCGAGC ATATCAAGAT GGACATCCTG 
CCGCGGATCT GCCGTGGCGA ATTGTGCTTC GCCATCGGCA TGAGCGAGCC GAATTCCGGC 
TCAGACCTGT TTGCCGCCAA GACCAAGGCG ACCAAGACCG ACGGCGGCTA TCTGATCAAC 
GGCTCGAAGA TCTGGACCAC CTCGGCGCAC ATCGCCGACT ACATGATCGC GATCTTCCGC 
ACCTCGCCGC CCACCAAGGA AAACCGCCGC CACGGCCTCA CCCAGTTCCT GGTCAACATG 
AAGTCGCCGG GCATCAAGGT GAACCCGATC GCGCAGATCA CCGGGCAGTA CGAATTCAAC 
GAGGTGGTGT TCACCGACGT GTTCGTGCCG GACGATCATT TGCTCGGCGA GGTCGACGGC 
GCCTGGAAGC AGGCGACGTC CGAACTCGCC TACGAGCGTT CGGGACCGGA ACGCTTCCTC 
GAAACCTATT ACGTGCTGAC CGAGCTGGTC CGCGCGCTCG GCCCTGATCC GGATACGCGC 
GGCGCCGAGG GCATCGGCCG TCTGGTGGCG CAGCTCCATA CCATGCGGCG AATGTCGGTG 
TCGGTGGCCG GCATGCTGCA GGCCGGCAAG GAGCCGGTGG TCGAGGCCTC GATCGTCAAG 
GACATCGGCA CGATCTGGGA GCAGCAACTG CCGCACCGGG TGCGTGAGCT CGCCGCCTTC 
GTCGACGGCG AGGCGTCGAA TCATGCAACG CTCGACGAGC TGACGGCGTT CGCCACCAAG 
CTGGCGCCGA AGCTCACCAT CCAGGGCGGC ACCACCGAGG TGCTGCGCGG CATCATCGCC 
CGCGGGCTCG GCCTGCGCTG A
 
Protein sequence
MTAALRFDPI RLPPVCEELR KEVRAFLAEE IAAGTFDPNK PQREDSDAPE FSRRVGERGW 
LGMTWPKKYG GHERTFLERY VVTEEMRIAN APTRRFFVAD RQSGPVLLKY APEHIKMDIL 
PRICRGELCF AIGMSEPNSG SDLFAAKTKA TKTDGGYLIN GSKIWTTSAH IADYMIAIFR 
TSPPTKENRR HGLTQFLVNM KSPGIKVNPI AQITGQYEFN EVVFTDVFVP DDHLLGEVDG 
AWKQATSELA YERSGPERFL ETYYVLTELV RALGPDPDTR GAEGIGRLVA QLHTMRRMSV 
SVAGMLQAGK EPVVEASIVK DIGTIWEQQL PHRVRELAAF VDGEASNHAT LDELTAFATK 
LAPKLTIQGG TTEVLRGIIA RGLGLR