| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1909 |
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| Symbol | |
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| ID | 6409569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 2058207 |
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| End bp | 2059454 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711795 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001990907 |
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| Protein GI | 192290302 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.337795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCG ACGATACCCC GCAGGAAGCC GAATTCCGCG CCAAGGCGCG CGCCTGGATC
GACGCCAACG CGCCGAAGCA ATACGAGGAA GAGCTGCGCA AAGCGTCGCT CGGCCGGGTC
GTGCTGAAGG GCGCCAATAT TCTCGAGGTC GCCAAGGCCT GGCAGAAGAA GAAGGCGGAT
GCGGGCTGGG CCGTTCCGCA TTGGCCGAAG GAATATGGCG GCCGCGGCGC GTCGCCGATC
GAGCGCGTGA TCTGGCAGCA GGAAGAGGGC GTGTTCGGCA AGCTCACGGC GATGTTCATC
ATCGGCCAGG GCATGTGCGG ACCGACCATG ATGGCCTACG CCTCGGAAGA GCAGAAGCGG
CACTACCTGC CGCCGCTCGG CTCCGGCGAG AAGATCTGGT GCCAGCTGTT CTCCGAGCCG
GCCGGCGGCT CCGACGTTGC GGGCCTGCGG ACGCGCGCCG AGAAGGACGG TGACGACTGG
ATCATCAACG GCCAGAAGAT CTGGACCTCC GGCGCGCACT ACTCGGATTA CGGCATCCTG
ATCACCCGCA CCGACCCGAC CGTGCCCAAG CACAAGGGTC TGACGATGTT CTTCCTCGAC
ATGAAGAGCG AAGGCGTCGA GGTGCGGCCG ATCAAGCAGG CCAACGGCAA TTCCGACTTC
AACGAGGTGT ACTTCACCAA CGTGCGGATT CCGGACAGCC AGCGCCTTGG CGCCGTCGGC
GACGGCTGGA ACGTGTCGCT GACGACGCTG ATGAACGAGC GGATGTCGAT CGGCGCCAAC
GTCGCGACCG GCTTCCCGGA GCTGTTCGAT TACTGCTCGT CGCTGACGCT CGACGGTGCG
CCGGCGCTCG ACGATCGCGC GGTGCGCAGC AAGCTTGCGA ACTGGGCGGT GAAGGCCAGC
GGCCTGCGCT ACACTTCGTT CCGGTCGATC TCGGCGCTGT CGAAGGGCCA GCGTCCGGGT
CCGGAGAACT CGATCGGCAA GCTGGTCGCC GGTTCGATGA TCCAGGAAGT CGCGATGTAT
GCGCTCGATC TGCAGGGCGC CGCCGGCGTG CTGAGCGGGC CGGAGGATGC TGAGGTCGCC
GGCCGTTTCC AGGCGATGCT GCTGCGCTCG CCGGCGACCC GTGTCGAAGG CGGCACCGAC
GAGATCCTGC GCAACATCAT CGCCGAGCGC GTGCTTGGCC TGCCCGGTGA CATTCGGGTC
GACAAGGACG TGCCGTTCAA CCAGATCCCG ACCAAGGGGC GAGCTTAA
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| Protein sequence | MNFDDTPQEA EFRAKARAWI DANAPKQYEE ELRKASLGRV VLKGANILEV AKAWQKKKAD
AGWAVPHWPK EYGGRGASPI ERVIWQQEEG VFGKLTAMFI IGQGMCGPTM MAYASEEQKR
HYLPPLGSGE KIWCQLFSEP AGGSDVAGLR TRAEKDGDDW IINGQKIWTS GAHYSDYGIL
ITRTDPTVPK HKGLTMFFLD MKSEGVEVRP IKQANGNSDF NEVYFTNVRI PDSQRLGAVG
DGWNVSLTTL MNERMSIGAN VATGFPELFD YCSSLTLDGA PALDDRAVRS KLANWAVKAS
GLRYTSFRSI SALSKGQRPG PENSIGKLVA GSMIQEVAMY ALDLQGAAGV LSGPEDAEVA
GRFQAMLLRS PATRVEGGTD EILRNIIAER VLGLPGDIRV DKDVPFNQIP TKGRA
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