More than 300 homologs were found in PanDaTox collection
for query gene Franean1_4294 on replicon NC_009921
Organism: Frankia sp. EAN1pec



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_4294  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
368 aa  747    Frankia sp. EAN1pec  Bacteria  normal  0.83932  normal  0.79155 
 
 
-
 
NC_009921  Franean1_6924  acyl-CoA dehydrogenase domain-containing protein  89.95 
 
 
365 aa  679    Frankia sp. EAN1pec  Bacteria  normal  normal  0.386717 
 
 
-
 
NC_008726  Mvan_4217  acyl-CoA dehydrogenase domain-containing protein  73.05 
 
 
376 aa  564  1.0000000000000001e-159  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3763  acyl-CoA dehydrogenase domain-containing protein  72.92 
 
 
380 aa  550  1e-155  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3751  acyl-CoA dehydrogenase-like protein  72.92 
 
 
380 aa  548  1e-155  Mycobacterium sp. MCS  Bacteria  normal  0.22899  n/a   
 
 
-
 
NC_008705  Mkms_3824  acyl-CoA dehydrogenase domain-containing protein  72.92 
 
 
380 aa  548  1e-155  Mycobacterium sp. KMS  Bacteria  normal  0.304031  normal 
 
 
-
 
NC_009338  Mflv_2435  acyl-CoA dehydrogenase domain-containing protein  72.12 
 
 
378 aa  547  1e-154  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.619601 
 
 
-
 
NC_009921  Franean1_2706  acyl-CoA dehydrogenase domain-containing protein  38.81 
 
 
385 aa  250  3e-65  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4145  acyl-CoA dehydrogenase domain-containing protein  40.1 
 
 
403 aa  225  1e-57  Mycobacterium sp. JLS  Bacteria  normal  normal  0.639468 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  39.29 
 
 
386 aa  222  7e-57  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  37.24 
 
 
393 aa  220  3e-56  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13593  acyl-CoA dehydrogenase fadE30  38.18 
 
 
385 aa  220  3.9999999999999997e-56  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000404245  normal  0.123125 
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  37.21 
 
 
382 aa  215  9e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4254  acyl-CoA dehydrogenase domain-containing protein  37.2 
 
 
362 aa  214  1.9999999999999998e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4303  acyl-CoA dehydrogenase domain-containing protein  38.61 
 
 
362 aa  213  3.9999999999999995e-54  Frankia sp. EAN1pec  Bacteria  normal  0.626393  normal  0.734858 
 
 
-
 
NC_009077  Mjls_3805  acyl-CoA dehydrogenase domain-containing protein  40.65 
 
 
348 aa  213  5.999999999999999e-54  Mycobacterium sp. JLS  Bacteria  normal  0.431838  normal  0.425 
 
 
-
 
NC_008146  Mmcs_3819  acyl-CoA dehydrogenase-like protein  40.65 
 
 
348 aa  213  5.999999999999999e-54  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3893  acyl-CoA dehydrogenase domain-containing protein  40.65 
 
 
348 aa  213  5.999999999999999e-54  Mycobacterium sp. KMS  Bacteria  normal  0.402551  normal 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  36.02 
 
 
378 aa  212  7e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_009077  Mjls_5078  acyl-CoA dehydrogenase domain-containing protein  36.5 
 
 
384 aa  212  9e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.292219 
 
 
-
 
NC_008146  Mmcs_4693  acyl-CoA dehydrogenase-like protein  36.5 
 
 
384 aa  212  9e-54  Mycobacterium sp. MCS  Bacteria  normal  0.311916  n/a   
 
 
-
 
NC_008705  Mkms_4779  acyl-CoA dehydrogenase domain-containing protein  36.5 
 
 
384 aa  212  9e-54  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  35.9 
 
 
396 aa  211  1e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  37.53 
 
 
415 aa  211  2e-53  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3995  acyl-CoA dehydrogenase domain protein  35.07 
 
 
419 aa  211  2e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  0.30356  n/a   
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  40.27 
 
 
383 aa  210  3e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
386 aa  209  6e-53  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_009338  Mflv_2394  acyl-CoA dehydrogenase domain-containing protein  36.46 
 
 
361 aa  209  8e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.233029  normal 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  37.23 
 
 
383 aa  208  1e-52  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5285  acyl-CoA dehydrogenase domain-containing protein  36.57 
 
 
384 aa  205  9e-52  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.301453 
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  36.29 
 
 
382 aa  204  1e-51  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  34.39 
 
 
388 aa  204  2e-51  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  37.4 
 
 
381 aa  203  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  36.1 
 
 
380 aa  202  5e-51  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  35.57 
 
 
392 aa  201  9.999999999999999e-51  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  35.31 
 
 
415 aa  201  9.999999999999999e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  34.18 
 
 
396 aa  201  9.999999999999999e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  35.48 
 
 
414 aa  201  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
393 aa  201  1.9999999999999998e-50  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  34.54 
 
 
414 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  34.25 
 
 
415 aa  199  7.999999999999999e-50  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  33.33 
 
 
396 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  36.91 
 
 
393 aa  197  2.0000000000000003e-49  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_007511  Bcep18194_B1437  Acyl-CoA dehydrogenase  34.04 
 
 
389 aa  197  3e-49  Burkholderia sp. 383  Bacteria  normal  0.0732196  normal 
 
 
-
 
CP001800  Ssol_0320  acyl-CoA dehydrogenase domain protein  33.42 
 
 
370 aa  196  4.0000000000000005e-49  Sulfolobus solfataricus 98/2  Archaea  normal  0.25734  n/a   
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  33.59 
 
 
415 aa  196  4.0000000000000005e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_009719  Plav_0496  acyl-CoA dehydrogenase domain-containing protein  33.76 
 
 
400 aa  196  6e-49  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.954912  normal 
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  34.78 
 
 
413 aa  195  8.000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  36.49 
 
 
378 aa  195  9e-49  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  35.34 
 
 
394 aa  195  1e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.19 
 
 
398 aa  195  1e-48  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009565  TBFG_11963  acyl-CoA dehydrogenase fadE17  36.55 
 
 
409 aa  195  1e-48  Mycobacterium tuberculosis F11  Bacteria  normal  0.0444584  normal  0.860383 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  37.24 
 
 
390 aa  195  1e-48  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_012792  Vapar_5500  acyl-CoA dehydrogenase domain protein  35.73 
 
 
386 aa  195  1e-48  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  34.69 
 
 
397 aa  194  2e-48  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  35.81 
 
 
398 aa  194  2e-48  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  37.53 
 
 
379 aa  194  2e-48  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  32.39 
 
 
396 aa  194  2e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
398 aa  193  5e-48  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  34.66 
 
 
398 aa  192  6e-48  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  34.94 
 
 
398 aa  192  6e-48  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  34.94 
 
 
398 aa  192  6e-48  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  34.73 
 
 
462 aa  191  1e-47  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  35.84 
 
 
398 aa  192  1e-47  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  37.39 
 
 
396 aa  192  1e-47  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  34.68 
 
 
398 aa  191  2e-47  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  35.46 
 
 
398 aa  191  2e-47  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13595  acyl-CoA dehydrogenase fadE31  35.05 
 
 
377 aa  191  2e-47  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000120639  normal  0.258893 
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  33.67 
 
 
415 aa  191  2e-47  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  35.46 
 
 
398 aa  191  2e-47  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  35.46 
 
 
398 aa  191  2e-47  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  35.46 
 
 
398 aa  191  2e-47  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  35.46 
 
 
398 aa  191  2e-47  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  35.16 
 
 
398 aa  191  2e-47  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8743  acyl-CoA dehydrogenase domain protein  36.03 
 
 
404 aa  191  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.316323 
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  35.46 
 
 
398 aa  191  2e-47  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  32.23 
 
 
396 aa  190  2.9999999999999997e-47  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_009485  BBta_5149  putative acyl-CoA dehydrogenase  34.35 
 
 
393 aa  190  2.9999999999999997e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.195919  normal  0.0612186 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  32.9 
 
 
393 aa  190  4e-47  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  35.26 
 
 
398 aa  190  4e-47  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1366  acyl-CoA dehydrogenase domain protein  34.96 
 
 
380 aa  190  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.696625 
 
 
-
 
NC_009427  Saro_3557  acyl-CoA dehydrogenase domain-containing protein  34.16 
 
 
404 aa  189  4e-47  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.255939  n/a   
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  36.02 
 
 
374 aa  189  8e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_007948  Bpro_3845  acyl-CoA dehydrogenase-like  32.38 
 
 
393 aa  188  1e-46  Polaromonas sp. JS666  Bacteria  normal  0.634206  normal 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  35.44 
 
 
400 aa  188  1e-46  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  33.25 
 
 
414 aa  188  1e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  33.5 
 
 
419 aa  188  1e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  32.72 
 
 
392 aa  188  1e-46  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  33.43 
 
 
396 aa  187  2e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3780  acyl-CoA dehydrogenase domain-containing protein  36.72 
 
 
374 aa  187  2e-46  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_51100  acyl-CoA dehydrogenase  36.94 
 
 
381 aa  187  2e-46  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.28895  decreased coverage  0.000000076859 
 
 
-
 
NC_008782  Ajs_3393  acyl-CoA dehydrogenase domain-containing protein  34.2 
 
 
393 aa  188  2e-46  Acidovorax sp. JS42  Bacteria  normal  normal  0.389251 
 
 
-
 
NC_014165  Tbis_0801  acyl-CoA dehydrogenase domain-containing protein  35.07 
 
 
736 aa  187  3e-46  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  34.24 
 
 
432 aa  187  4e-46  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2731  acyl-CoA dehydrogenase domain protein  34.2 
 
 
393 aa  186  5e-46  Acidovorax ebreus TPSY  Bacteria  normal  0.572284  n/a   
 
 
-
 
NC_009656  PSPA7_4361  acyl-CoA dehydrogenase  35.03 
 
 
381 aa  186  5e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  33.5 
 
 
398 aa  186  6e-46  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007974  Rmet_5141  acyl-CoA dehydrogenase  33.17 
 
 
412 aa  186  6e-46  Cupriavidus metallidurans CH34  Bacteria  normal  0.337451  normal  0.365814 
 
 
-
 
NC_009719  Plav_2018  acyl-CoA dehydrogenase domain-containing protein  33.15 
 
 
411 aa  186  6e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.642987 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  33.95 
 
 
393 aa  186  6e-46  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>