More than 300 homologs were found in PanDaTox collection
for query gene Gbro_3995 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_3995  acyl-CoA dehydrogenase domain protein  100 
 
 
419 aa  842    Gordonia bronchialis DSM 43247  Bacteria  normal  0.30356  n/a   
 
 
-
 
NC_009565  TBFG_13593  acyl-CoA dehydrogenase fadE30  67.84 
 
 
385 aa  551  1e-156  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000404245  normal  0.123125 
 
 
-
 
NC_008726  Mvan_5285  acyl-CoA dehydrogenase domain-containing protein  68.69 
 
 
384 aa  543  1e-153  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.301453 
 
 
-
 
NC_009077  Mjls_5078  acyl-CoA dehydrogenase domain-containing protein  67.93 
 
 
384 aa  541  1e-153  Mycobacterium sp. JLS  Bacteria  normal  normal  0.292219 
 
 
-
 
NC_008146  Mmcs_4693  acyl-CoA dehydrogenase-like protein  67.93 
 
 
384 aa  541  1e-153  Mycobacterium sp. MCS  Bacteria  normal  0.311916  n/a   
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  68.02 
 
 
382 aa  543  1e-153  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4779  acyl-CoA dehydrogenase domain-containing protein  67.93 
 
 
384 aa  541  1e-153  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  68.02 
 
 
382 aa  536  1e-151  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  62.93 
 
 
400 aa  497  1e-139  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  65.9 
 
 
378 aa  495  1e-139  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  63.32 
 
 
386 aa  493  9.999999999999999e-139  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  61.44 
 
 
393 aa  480  1e-134  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  62.06 
 
 
386 aa  476  1e-133  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  59.69 
 
 
381 aa  461  9.999999999999999e-129  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  52.72 
 
 
396 aa  441  1e-123  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1442  Acyl-CoA dehydrogenase  54.41 
 
 
400 aa  421  1e-116  Burkholderia sp. 383  Bacteria  normal  0.100944  normal 
 
 
-
 
NC_007347  Reut_A1569  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.99 
 
 
403 aa  409  1e-113  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3606  acyl-CoA dehydrogenase domain-containing protein  53.54 
 
 
390 aa  407  1.0000000000000001e-112  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.873151  n/a   
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  54.11 
 
 
393 aa  407  1.0000000000000001e-112  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  53.13 
 
 
392 aa  402  1e-111  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  42.72 
 
 
419 aa  298  9e-80  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11963  acyl-CoA dehydrogenase fadE17  41.56 
 
 
409 aa  296  4e-79  Mycobacterium tuberculosis F11  Bacteria  normal  0.0444584  normal  0.860383 
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  40.97 
 
 
378 aa  286  4e-76  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  40.9 
 
 
392 aa  286  5.999999999999999e-76  Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_007511  Bcep18194_B1437  Acyl-CoA dehydrogenase  41.12 
 
 
389 aa  273  4.0000000000000004e-72  Burkholderia sp. 383  Bacteria  normal  0.0732196  normal 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  42.54 
 
 
394 aa  273  4.0000000000000004e-72  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  39.9 
 
 
462 aa  270  2.9999999999999997e-71  Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_009901  Spea_2159  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
385 aa  266  7e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  41.48 
 
 
383 aa  263  4e-69  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  39.85 
 
 
388 aa  263  4.999999999999999e-69  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4620  acyl-CoA dehydrogenase domain-containing protein  37.44 
 
 
393 aa  258  1e-67  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009427  Saro_3756  acyl-CoA dehydrogenase domain-containing protein  40 
 
 
381 aa  256  7e-67  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1985  acyl-CoA dehydrogenase  40.45 
 
 
381 aa  254  3e-66  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3628  acyl-CoA dehydrogenase domain-containing protein  39.11 
 
 
383 aa  253  6e-66  Sphingomonas wittichii RW1  Bacteria  normal  0.373351  normal  0.221875 
 
 
-
 
NC_013131  Caci_1366  acyl-CoA dehydrogenase domain protein  38.37 
 
 
380 aa  248  1e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.696625 
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  34.99 
 
 
385 aa  248  2e-64  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_008699  Noca_2769  acyl-CoA dehydrogenase domain-containing protein  40.53 
 
 
393 aa  248  2e-64  Nocardioides sp. JS614  Bacteria  normal  0.153343  n/a   
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  38.52 
 
 
378 aa  246  6.999999999999999e-64  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_51100  acyl-CoA dehydrogenase  38.58 
 
 
381 aa  245  8e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.28895  decreased coverage  0.000000076859 
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  35.52 
 
 
414 aa  244  3e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2351  acyl-CoA dehydrogenase domain protein  39.75 
 
 
378 aa  244  3e-63  Conexibacter woesei DSM 14684  Bacteria  normal  0.188906  normal  0.0134667 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  38.87 
 
 
380 aa  242  7.999999999999999e-63  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_008146  Mmcs_4695  acyl-CoA dehydrogenase-like protein  39.45 
 
 
389 aa  241  2e-62  Mycobacterium sp. MCS  Bacteria  normal  0.0252616  n/a   
 
 
-
 
NC_008705  Mkms_4781  acyl-CoA dehydrogenase domain-containing protein  39.45 
 
 
389 aa  241  2e-62  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4235  pimeloyl-CoA dehydrogenase, large subunit  37.66 
 
 
396 aa  240  2.9999999999999997e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2617  acyl-CoA dehydrogenase domain-containing protein  39.17 
 
 
411 aa  241  2.9999999999999997e-62  Salinispora tropica CNB-440  Bacteria  normal  0.583058  normal 
 
 
-
 
NC_009077  Mjls_4137  acyl-CoA dehydrogenase domain-containing protein  40.9 
 
 
381 aa  239  6.999999999999999e-62  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5080  acyl-CoA dehydrogenase domain-containing protein  38.56 
 
 
389 aa  239  9e-62  Mycobacterium sp. JLS  Bacteria  normal  normal  0.302814 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  37.16 
 
 
390 aa  238  1e-61  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  36.64 
 
 
398 aa  238  2e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1749  Acyl-CoA dehydrogenase-like  37.5 
 
 
396 aa  236  7e-61  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0172136 
 
 
-
 
NC_014158  Tpau_3838  acyl-CoA dehydrogenase domain protein  38.21 
 
 
385 aa  235  9e-61  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4361  acyl-CoA dehydrogenase  36.59 
 
 
381 aa  235  1.0000000000000001e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13595  acyl-CoA dehydrogenase fadE31  38.58 
 
 
377 aa  234  1.0000000000000001e-60  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000120639  normal  0.258893 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  36.39 
 
 
398 aa  234  2.0000000000000002e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2229  acyl-CoA dehydrogenase-like  37.68 
 
 
396 aa  234  2.0000000000000002e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.033637  normal  0.0664218 
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  36.39 
 
 
398 aa  234  3e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  37.31 
 
 
374 aa  231  2e-59  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  35.52 
 
 
397 aa  231  2e-59  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  33.82 
 
 
415 aa  231  3e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_012792  Vapar_5500  acyl-CoA dehydrogenase domain protein  40.44 
 
 
386 aa  228  2e-58  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  36.79 
 
 
398 aa  228  2e-58  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4303  acyl-CoA dehydrogenase domain-containing protein  36.39 
 
 
362 aa  228  2e-58  Frankia sp. EAN1pec  Bacteria  normal  0.626393  normal  0.734858 
 
 
-
 
NC_009719  Plav_0609  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
393 aa  228  2e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.172762 
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  34.47 
 
 
414 aa  228  2e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  37.6 
 
 
397 aa  228  2e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  35.68 
 
 
399 aa  228  2e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  36.32 
 
 
398 aa  227  2e-58  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  35.68 
 
 
415 aa  227  3e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  36.32 
 
 
398 aa  227  4e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  36.32 
 
 
398 aa  227  4e-58  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  36.32 
 
 
398 aa  227  4e-58  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  36.32 
 
 
398 aa  227  4e-58  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  36.32 
 
 
398 aa  227  4e-58  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  37.77 
 
 
397 aa  226  5.0000000000000005e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_010338  Caul_1361  acyl-CoA dehydrogenase domain-containing protein  38.94 
 
 
400 aa  226  5.0000000000000005e-58  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  38.31 
 
 
393 aa  226  5.0000000000000005e-58  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  38.9 
 
 
396 aa  226  6e-58  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  35.75 
 
 
393 aa  226  7e-58  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  39.28 
 
 
383 aa  226  7e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  37.84 
 
 
395 aa  225  1e-57  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009921  Franean1_4582  acyl-CoA dehydrogenase domain-containing protein  35.57 
 
 
418 aa  225  1e-57  Frankia sp. EAN1pec  Bacteria  normal  0.770197  normal  0.671641 
 
 
-
 
NC_009338  Mflv_1479  acyl-CoA dehydrogenase domain-containing protein  37.82 
 
 
374 aa  225  1e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0233  pimeloyl-CoA dehydrogenase, large subunit  36.32 
 
 
400 aa  224  2e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.172287  normal  0.0105147 
 
 
-
 
NC_010524  Lcho_1240  acyl-CoA dehydrogenase domain-containing protein  38.83 
 
 
379 aa  224  2e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276954 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  36.27 
 
 
398 aa  224  2e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_007958  RPD_3550  acyl-CoA dehydrogenase-like  36.25 
 
 
396 aa  223  4e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  35.43 
 
 
393 aa  223  4e-57  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_010512  Bcenmc03_6832  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
403 aa  223  4e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.111303  normal 
 
 
-
 
NC_009484  Acry_0253  acyl-CoA dehydrogenase domain-containing protein  35.84 
 
 
403 aa  223  4.9999999999999996e-57  Acidiphilium cryptum JF-5  Bacteria  normal  0.0424769  n/a   
 
 
-
 
NC_011894  Mnod_5441  pimeloyl-CoA dehydrogenase, large subunit  36.14 
 
 
402 aa  223  4.9999999999999996e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.504048  n/a   
 
 
-
 
NC_007348  Reut_B3835  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.25 
 
 
401 aa  223  6e-57  Ralstonia eutropha JMP134  Bacteria  normal  0.520292  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  35.64 
 
 
398 aa  223  6e-57  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009719  Plav_1065  acyl-CoA dehydrogenase domain-containing protein  35.15 
 
 
402 aa  223  6e-57  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_4958  acyl-CoA dehydrogenase domain-containing protein  36.93 
 
 
397 aa  223  7e-57  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A3192  putative pimeloyl-CoA dehydrogenase (large subunit), PimC-like  36.59 
 
 
398 aa  222  9.999999999999999e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2816  acyl-CoA dehydrogenase domain-containing protein  37.74 
 
 
411 aa  222  9.999999999999999e-57  Salinispora arenicola CNS-205  Bacteria  normal  0.144494  hitchhiker  0.00382252 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  37.66 
 
 
452 aa  220  3e-56  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009485  BBta_7071  putative pimeloyl-CoA dehydrogenase pimC (large subunit)  35.5 
 
 
396 aa  221  3e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0928  acyl-CoA dehydrogenase domain protein  34.56 
 
 
388 aa  220  3e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
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