| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3824 |
|---|
| Symbol | |
|---|
| ID | 4611759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 4037728 |
|---|
| End bp | 4038870 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639793504 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_939807 |
|---|
| Protein GI | 119869855 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.304031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG CCGTTCAGTA CTCCGATCCC GCCGAGTTCC GGTCTCAGCT GGTGGCCTGG
CTCGGCGAGA ACGATCTGAC CCCACCCGAG GACCATTCGC TGGAAGGCCA CATCCGGCAG
TTCGCCCGGG TGCAGAGGGC GCTCTACGAC GCGGGCTGGA TGCGCTACGG GTGGCCCGAG
AGCGCGGGCG GCCTCGGCGG ACCGGCGATC CTTCGGGCCA TCGTCGGCGA GGAGGTGGTC
GGTCGCCGAC TGGCCGAACC TGGGCCGTAC TCGATGCTCG AGGTGCTGGC GCCGACGATG
ATCGACTACG CCGCCCCCGA TCTGGCCGCC GAGATGGTGC CGAAACTGCT CAGCGGCGAA
GAGCAGTGGT GCCAAGGGTT CTCCGAACCC GGTTCGGGTA GCGATCTGGC ATCGCTGACC
ACCCGCGCCG TGCTCGATCC CTCATCCGGG GGGAACACCT ACGTCGTCAA CGGCCAGAAG
GTCTGGACCA GCTTCGCGCA GTACTCCCAC CGGTGCATCC TGCTGACCCG CACCGGCGAT
GCGAACACGC CGAACCACGA GGCGATCACC GCGTTCTTCG TCGACCTCGA CACCCCGGGT
ATCACCGTGC GGCCGCTGCG CACCATGCAC GACGTCGACG AATTCTGCGA GGTCTACTTC
GACGACGTCA GGGTGGACGC GAGCCGGATG CTCGGCAAAC CGGGCGACGG TTGGCGGCTG
GCGATGGATC TGCTGCCTTA CGAACGCTCC ACGTGCTTCT GGCAGCGCAT CGCCTACCTG
TACTCGCGGT TCGACGCGCT CGTCGAGGAA GTCAAGCGGG TCGGTCAGGC CGTGGACACC
GACATGGGCG ACGTGTACCT GGCGCTGCAC ACGCTGCGGT GCCGTTCCCG CGCCACCCAG
CACCGGCTGG CCGACGGTCA GAAACTCGGG CCGGACACCT CCATCGACAA GGTCCTGCTG
GCCGGCGCCG AACAGCTCCT CTACGACACC GCGCGTGATC TGCTGCCCGG CGCCATCGAA
CTCGACGAGA CCGAATGGCG CACCGAGTAC CTGTACTCGC GGGCGGCCAC CATCTACGGC
GGCACCGCCG AGGTGCAGCG CAACATCATC GCCCGCCGCC TGCTCGACCT CGGGAAGGAG
TGA
|
|---|
| Protein sequence | MTEAVQYSDP AEFRSQLVAW LGENDLTPPE DHSLEGHIRQ FARVQRALYD AGWMRYGWPE
SAGGLGGPAI LRAIVGEEVV GRRLAEPGPY SMLEVLAPTM IDYAAPDLAA EMVPKLLSGE
EQWCQGFSEP GSGSDLASLT TRAVLDPSSG GNTYVVNGQK VWTSFAQYSH RCILLTRTGD
ANTPNHEAIT AFFVDLDTPG ITVRPLRTMH DVDEFCEVYF DDVRVDASRM LGKPGDGWRL
AMDLLPYERS TCFWQRIAYL YSRFDALVEE VKRVGQAVDT DMGDVYLALH TLRCRSRATQ
HRLADGQKLG PDTSIDKVLL AGAEQLLYDT ARDLLPGAIE LDETEWRTEY LYSRAATIYG
GTAEVQRNII ARRLLDLGKE
|
|---|
| |